RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 LRTM1Q9HBL6 345 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SARS2Q9NP81 518 aaKnown RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 NPAP1Q9NZP6 1156 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 TBC1D24Q9ULP9 559 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 AP3D1O14617 1153 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 POMCP01189 267 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 DNTTP04053 509 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 CRYBA2P53672 197 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 YBEYP58557 167 aaPredicted RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 EFEMP1Q12805 493 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 TTLL9Q3SXZ7 439 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 MLIPQ5VWP3 458 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 CCDC190Q86UF4 302 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SYTL1Q8IYJ3 562 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 FCGR1BQ92637 280 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 CEP295NLQ96MC4 621 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 CENPOQ9BU64 300 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 OR51E2Q9H255 320 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 BPIFA1Q9NP55 256 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SNX6Q9UNH7 406 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SAMD4AQ9UPU9 718 aaKnown RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 FAM172BPA6NC97 362 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SLC28A1O00337 649 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 SNX4O95219 450 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 ZNF682O95780 498 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 F11P03951 625 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 MAD2L1Q13257 205 aaPredicted RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 TIGD6Q17RP2 521 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 MRPL10Q7Z7H8 261 aaKnown RBP14.95□□□□□ -0.02
SDF4-207ENST00000494748 UBQLNLQ8IYU4 475 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 COPS4Q9BT78 406 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 KRT84Q9NSB2 600 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 PLCXD1Q9NUJ7 323 aa14.95□□□□□ -0.02
SDF4-207ENST00000494748 MYO1GB0I1T2 1018 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 CCNKO75909 580 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 ADRA2AP08913 450 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 HEATR4Q86WZ0 1026 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 DNAJB8Q8NHS0 232 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 LKAAEAR1Q8TD35 194 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 POP5Q969H6 163 aaKnown RBP14.94□□□□□ -0.02
SDF4-207ENST00000494748 EXOC2Q96KP1 924 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 B3GALT6Q96L58 329 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 RPRD1AQ96P16 312 aaPredicted RBP14.94□□□□□ -0.02
SDF4-207ENST00000494748 ACPTQ9BZG2 426 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 ZNF490Q9ULM2 529 aaPredicted RBP14.94□□□□□ -0.02
SDF4-207ENST00000494748 TMEM229AB2RXF0 380 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 MANBAO00462 879 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 CA12O43570 354 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 VIPP01282 170 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 LPOP22079 712 aaPredicted RBP14.94□□□□□ -0.02
SDF4-207ENST00000494748 DDR2Q16832 855 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 UTS2BQ765I0 119 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 PTOV1Q86YD1 416 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 ZZZ3Q8IYH5 903 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 DNAJC22Q8N4W6 341 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 PSKH2Q96QS6 385 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 VPS9D1Q9Y2B5 631 aa14.94□□□□□ -0.02
SDF4-207ENST00000494748 H7C0S8 307 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 TLL1O43897 1013 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 SEMA3DO95025 777 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 ESR1P03372 595 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 CDK1P06493 297 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 ALOX12P18054 663 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 EPORP19235 508 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 TACR1P25103 407 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 ITGA1P56199 1179 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 CLDN8P56748 225 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 CAMK2GQ13555 558 aaPredicted RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 CACHD1Q5VU97 1274 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 RSBN1Q5VWQ0 802 aaPredicted RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 SPRYD7Q5W111 196 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 TSEN54Q7Z6J9 526 aaKnown RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 ADAMTSL2Q86TH1 951 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 SERPINA11Q86U17 422 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 FAM124AQ86V42 546 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 SCN4BQ8IWT1 228 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 GGHQ92820 318 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 EID2BQ96D98 161 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 RMDN1Q96DB5 314 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 ST6GAL2Q96JF0 529 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 Q96MT0 163 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 RAD9AQ99638 391 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 MARCH7Q9H992 704 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 C2orf81A6NN90 581 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 GUCA1CO95843 209 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 FABP3P05413 133 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 PXNP49023 591 aaPredicted RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 DMPKQ09013 629 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 SLC39A12Q504Y0 691 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 DOK6Q6PKX4 331 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 TLK2Q86UE8 772 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 CDK5RAP1Q96SZ6 601 aaKnown RBP14.93□□□□□ -0.02
SDF4-207ENST00000494748 OARD1Q9Y530 152 aa14.93□□□□□ -0.02
SDF4-207ENST00000494748 WDR47O94967 919 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms