RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 CPSF6Q16630 551 aaKnown RBP eCLIP19.96■□□□□ 0.79
KPNA1-210ENST00000494339 THEMIS2Q5TEJ8 643 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 LYSMD4Q5XG99 296 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 ASRGL1Q7L266 308 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 OR52E1Q8NGJ3 308 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 PATE1Q8WXA2 126 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 MAELQ96JY0 434 aaKnown RBP19.96■□□□□ 0.79
KPNA1-210ENST00000494339 HBEGFQ99075 208 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 COLEC10Q9Y6Z7 277 aa19.96■□□□□ 0.79
KPNA1-210ENST00000494339 H0YHG0 523 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 VILLO15195 856 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 NME1P15531 152 aaKnown RBP19.95■□□□□ 0.78
KPNA1-210ENST00000494339 HTR6P50406 440 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 C21orf59P57076 290 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 ARHGAP19Q14CB8 494 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 PMS2CLQ68D20 193 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 SFTPA2Q8IWL1 248 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 CXorf40BQ96DE9 158 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 PTCD3Q96EY7 689 aaKnown RBP19.95■□□□□ 0.78
KPNA1-210ENST00000494339 LRMDAQ9H2I8 198 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 ARL8BQ9NVJ2 186 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 SPATA7Q9P0W8 599 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 ARMCX1Q9P291 453 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 TRPS1Q9UHF7 1281 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 SH2B3Q9UQQ2 575 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 KCNE2Q9Y6J6 123 aa19.95■□□□□ 0.78
KPNA1-210ENST00000494339 HRO43593 1189 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 GPR37L1O60883 481 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 NPPBP16860 134 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 NCF2P19878 526 aaPredicted RBP19.94■□□□□ 0.78
KPNA1-210ENST00000494339 SLC19A1P41440 591 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 IRF8Q02556 426 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 CYP2A13Q16696 494 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 XKR6Q5GH73 641 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 EFL1Q7Z2Z2 1120 aaKnown RBP19.94■□□□□ 0.78
KPNA1-210ENST00000494339 RAB42Q8N4Z0 105 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 JPH3Q8WXH2 748 aaPredicted RBP19.94■□□□□ 0.78
KPNA1-210ENST00000494339 NEIL2Q969S2 332 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 ACAT2Q9BWD1 397 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 G3BP2Q9UN86 482 aaKnown RBP19.94■□□□□ 0.78
KPNA1-210ENST00000494339 CLGNO14967 610 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 ESRRAP11474 423 aaPredicted RBP19.94■□□□□ 0.78
KPNA1-210ENST00000494339 HSD17B2P37059 387 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 RAB28P51157 221 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 PRAMEF13Q5VWM6 474 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 TMEM198Q66K66 360 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 IYDQ6PHW0 289 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 IL27RAQ6UWB1 636 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 LINC01555Q8NAE3 123 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 SH3KBP1Q96B97 665 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 MIPEPQ99797 713 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 ICKQ9UPZ9 632 aa19.94■□□□□ 0.78
KPNA1-210ENST00000494339 WFS1O76024 890 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 GNAZP19086 355 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 PLK5Q496M5 336 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 SGO1Q5FBB7 561 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 TMPRSS11BQ86T26 416 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 FBXL6Q8N531 539 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 L3MBTL4Q8NA19 623 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 FAM46DQ8NEK8 389 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 CEP70Q8NHQ1 597 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 FARSBQ9NSD9 589 aaKnown RBP19.93■□□□□ 0.78
KPNA1-210ENST00000494339 TMEM74BQ9NUR3 256 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 MRGBPQ9NV56 204 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 GIMAP2Q9UG22 337 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 FBXO4Q9UKT5 387 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 DYRK1BQ9Y463 629 aa19.93■□□□□ 0.78
KPNA1-210ENST00000494339 A0A1B0GVT2 93 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 ZNF839A8K0R7 811 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 CD22P20273 847 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 CCND1P24385 295 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 NDUFS1P28331 727 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 PTPN4P29074 926 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 PKLRP30613 574 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 UBAP2LQ14157 1087 aaKnown RBP19.92■□□□□ 0.78
KPNA1-210ENST00000494339 DOC2AQ14183 400 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 ABRAXAS2Q15018 415 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 GGTA1PQ4G0N0 100 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 CATSPEREQ5SY80 951 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 C11orf74Q86VG3 221 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 TRIM48Q8IWZ4 208 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 ACTRT2Q8TDY3 377 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 LMX1AQ8TE12 382 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 SMPDL3AQ92484 453 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 TUBGCP3Q96CW5 907 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 SLC7A6OSQ96CW6 309 aaPredicted RBP19.92■□□□□ 0.78
KPNA1-210ENST00000494339 MTFMTQ96DP5 389 aaKnown RBP19.92■□□□□ 0.78
KPNA1-210ENST00000494339 MARK4Q96L34 752 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 KIR3DX1Q9H7L2 352 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 AKTIPQ9H8T0 292 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 GPRC5BQ9NZH0 403 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 TAC3Q9UHF0 121 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 TAGLN3Q9UI15 199 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 CUL9Q8IWT3 2517 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 PI4KAP42356 2102 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 TNRC6BQ9UPQ9 1833 aaKnown RBP19.92■□□□□ 0.78
KPNA1-210ENST00000494339 KCNE1BA0A087WTH5 132 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 VARSP26640 1264 aaKnown RBP19.92■□□□□ 0.78
KPNA1-210ENST00000494339 PSMB5P28074 263 aa19.92■□□□□ 0.78
KPNA1-210ENST00000494339 ELOCQ15369 112 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms