RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 TRPC7Q9HCX4 862 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 MIOSQ9NXC5 875 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SPHK1Q9NYA1 384 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 ARMCX3Q9UH62 379 aaPredicted RBP2.22□□□□□ -2.05
LMNB1-207ENST00000494185 SLC24A2Q9UI40 661 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 APPL1Q9UKG1 709 aa2.22□□□□□ -2.05
LMNB1-207ENST00000494185 A0A1W2PPQ1 181 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PRR23AA6NEV1 266 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 CCDC69A6NI79 296 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 YDJCA8MPS7 323 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PRR32B1ATL7 298 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 TRIM77I1YAP6 450 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 RTCAO00442 366 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 CLDN4O14493 209 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SSX4O60224 188 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SEC22BO75396 215 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MED24O75448 989 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 WISP2O76076 250 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ZWINTO95229 277 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 BAG4O95429 457 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 EDN1P05305 212 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 RAB40ALP0C0E4 278 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 IGHV4-38-2P0DP08 117 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 CKMT2P17540 419 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SOAT1P35610 550 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PRKCIP41743 596 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FRKP42685 505 aaPredicted RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SLC9A3P48764 834 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MMP15P51511 669 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 HERV-K104P61576 105 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MBTD1Q05BQ5 628 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MZT1Q08AG7 82 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 RCN2Q14257 317 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FAM174BQ3ZCQ3 159 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 KBTBD12Q3ZCT8 623 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 KLHL26Q53HC5 615 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SPOUT1Q5T280 376 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PRR27Q6MZM9 219 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FAAP20Q6NZ36 180 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SMIM29Q86T20 159 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF554Q86TJ5 538 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PTOV1Q86YD1 416 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 LSMEM2Q8N112 164 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FBXO39Q8N4B4 442 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ARL6IP6Q8N6S5 226 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 RTL3Q8N8U3 475 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 TRIML1Q8N9V2 468 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FAM76AQ8TAV0 307 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 WDR20Q8TBZ3 569 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SEMA4DQ92854 862 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 SLAMF9Q96A28 289 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 NXNL1Q96CM4 212 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FAM81BQ96LP2 452 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 C17orf77Q96MU5 243 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 F2RL3Q96RI0 385 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PARK7Q99497 189 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 RHNO1Q9BSD3 238 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 UTP14AQ9BVJ6 771 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MTMR12Q9C0I1 747 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 FAM49AQ9H0Q0 323 aaPredicted RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 TNMDQ9H2S6 317 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 THAP9Q9H5L6 903 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM206Q9H813 350 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 IARS2Q9NSE4 1012 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 DNAJC17Q9NVM6 304 aaKnown RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 C2orf42Q9NWW7 574 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 DPP3Q9NY33 737 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 CNIH4Q9P003 139 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 VPS18Q9P253 973 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF624Q9P2J8 865 aaPredicted RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 IL19Q9UHD0 177 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ITGA11Q9UKX5 1188 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 AGTPBP1Q9UPW5 1226 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 KCNK7Q9Y2U2 307 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 MTF2Q9Y483 593 aaPredicted RBP2.21□□□□□ -2.06
LMNB1-207ENST00000494185 ABCC9O60706 1549 aa2.21□□□□□ -2.06
LMNB1-207ENST00000494185 PRSS51A0A1B0GVH4 220 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 A0A1W2PN81 502 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 A0A1W2PRB8 838 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 A0A1W2PRV1 198 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 FEZF1A0PJY2 475 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ANKUB1A6NFN9 424 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 C5orf60A6NFR6 353 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM221A6NGB7 291 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SDR42E2A6NKP2 422 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TO15178 435 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CIDEAO60543 219 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RNASEH1O60930 286 aaKnown RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 B3GALNT1O75752 331 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 DDHD2O94830 711 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CLPTM1O96005 669 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 IGLV1-44P01699 117 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SERPINB2P05120 415 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 OR2T7P0C7T2 308 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 UROSP10746 265 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TYMPP19971 482 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 DNASE1P24855 282 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CHRNB4P30926 498 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CHRNA7P36544 502 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CD86P42081 329 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms