RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GABRG3Q99928 467 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 SGPP1Q9BX95 441 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 DPY30Q9C005 99 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 ZDHHC5Q9C0B5 715 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 KLHL4Q9C0H6 718 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 OR52A5Q9H2C5 316 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 DPEP2Q9H4A9 486 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 ALG2Q9H553 416 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 COPS7BQ9H9Q2 264 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-208ENST00000494028 GPRC5BQ9NZH0 403 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 SLAMF8Q9P0V8 285 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 PPT2Q9UMR5 302 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 GPR34Q9UPC5 381 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 TMED5Q9Y3A6 229 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 SNX13Q9Y5W8 968 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 MYO9BQ13459 2157 aa10.33□□□□□ -0.76
CLCN6-208ENST00000494028 ATG2BQ96BY7 2078 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TCRBV5S2A0A599 114 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 H0YIV9 168 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CLGNO14967 610 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 DFNA5O60443 496 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 RNASEH1O60930 286 aaKnown RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 STAMBPO95630 424 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 NPPAP01160 153 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 ERGP11308 486 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 PRPS2P11908 318 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 HSD3B1P14060 373 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 AMD1P17707 334 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 HRH2P25021 359 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TACR1P25103 407 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 HSD3B2P26439 372 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 MAPK1P28482 360 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 SLC7A1P30825 629 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TIE1P35590 1138 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 IGFALSP35858 605 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 LTBRP36941 435 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 HNF4AP41235 474 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CASP2P42575 452 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 GALK1P51570 392 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CLNS1AP54105 237 aaKnown RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CLDN8P56748 225 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 MTPNP58546 118 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 PLOD1Q02809 727 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 PWP1Q13610 501 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 LRRC36Q1X8D7 754 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 XKR6Q5GH73 641 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TMEM196Q5HYL7 178 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 ANO7Q6IWH7 933 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 NANOGP8Q6NSW7 305 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TRMT11Q7Z4G4 463 aaKnown RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 DHFR2Q86XF0 187 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 LRRC56Q8IYG6 542 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CFAP206Q8IYR0 622 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 ADGRG5Q8IZF4 528 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 GOLM1Q8NBJ4 401 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 OR8J3Q8NGG0 315 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 OR9A1PQ8NGU1 263 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 DNAJB14Q8TBM8 379 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 GTF2H4Q92759 462 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 WDR34Q96EX3 536 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 PPM1MQ96MI6 270 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 HHIPQ96QV1 700 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 KCTD14Q9BQ13 255 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CPPED1Q9BRF8 314 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 EBPLQ9BY08 206 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TEX101Q9BY14 249 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 NANOGQ9H9S0 305 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 ITM2CQ9NQX7 267 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 MBNL1Q9NR56 388 aaKnown RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 SPATA6Q9NWH7 488 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-208ENST00000494028 CLDND1Q9NY35 253 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 USP22Q9UPT9 525 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 MAN2B2Q9Y2E5 1009 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 TMEM98Q9Y2Y6 226 aa10.32□□□□□ -0.76
CLCN6-208ENST00000494028 NUMA1Q14980 2115 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 DHRS12A0PJE2 317 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 PLRG1O43660 514 aaKnown RBP10.31□□□□□ -0.76
CLCN6-208ENST00000494028 PCDH8O95206 1070 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 ETHE1O95571 254 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 EGFP01133 1207 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 PGRP06401 933 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 HTR1EP28566 365 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 OXTRP30559 389 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 GRIA3P42263 894 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 OR4D2P58180 307 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 RPA4Q13156 261 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 BLMHQ13867 455 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 SLBPQ14493 270 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLCN6-208ENST00000494028 STARD3Q14849 445 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 GTDC1Q4AE62 458 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 TMEM259Q4ZIN3 620 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 CAPN13Q6MZZ7 669 aaPredicted RBP10.31□□□□□ -0.76
CLCN6-208ENST00000494028 HMBOX1Q6NT76 420 aa10.31□□□□□ -0.76
CLCN6-208ENST00000494028 SLCO4C1Q6ZQN7 724 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms