RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 UNC5DQ6UXZ4 953 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MMAAQ8IVH4 418 aaKnown RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 OR2L2Q8NH16 312 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 REPS1Q96D71 796 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ITCHQ96J02 903 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 COQ10BQ9H8M1 238 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 GULP1Q9UBP9 304 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 RUVBL1Q9Y265 456 aaKnown RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 KCNE2Q9Y6J6 123 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 SLC16A8O95907 504 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 APODP05090 189 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PSMC3P17980 439 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 GGT1P19440 569 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PRPS1L1P21108 318 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 HRH2P25021 359 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 NEK2P51955 445 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 CYP4F3Q08477 520 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 RUNDC3AQ59EK9 446 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 CAPN13Q6MZZ7 669 aaPredicted RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ANKRD54Q6NXT1 300 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 RIMKLAQ8IXN7 391 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 KRTCAP2Q8N6L1 136 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ELSPBP1Q96BH3 223 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 WDR34Q96EX3 536 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 COX14Q96I36 57 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 HIC2Q96JB3 615 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 SEMA6AQ9H2E6 1030 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 GORASP2Q9H8Y8 452 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 VAPAQ9P0L0 249 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ATXN10Q9UBB4 475 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 VPS29Q9UBQ0 182 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 FAM8A1Q9UBU6 413 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 KLHL33A6NCF5 533 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MGAT4DA6NG13 374 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 E7EQ34 232 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 K7ESM1 405 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ANXA6P08133 673 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 CDH1P12830 882 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 CD22P20273 847 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 TEAD1P28347 426 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PDHA2P29803 388 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PBLDP30039 288 aaPredicted RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 POLE2P56282 527 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 OR4D2P58180 307 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MTPNP58546 118 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MTAPQ13126 283 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 AGERQ15109 404 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PIP5KL1Q5T9C9 394 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 GLYATQ6IB77 296 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 NOXRED1Q6NXP6 359 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 FKBP9P1Q75LS8 142 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 CFAP206Q8IYR0 622 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 LILRA3Q8N6C8 439 aaPredicted RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MRPL38Q96DV4 380 aaKnown RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MED8Q96G25 268 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 APIPQ96GX9 242 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 ZNF583Q96ND8 569 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 C9orf16Q9BUW7 83 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 PBX4Q9BYU1 374 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 TRIM8Q9BZR9 551 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 FAM192AQ9GZU8 254 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 EHD1Q9H4M9 534 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 RPF2Q9H7B2 306 aaKnown RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 MSRAQ9UJ68 235 aa10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 DNMT3AQ9Y6K1 912 aaPredicted RBP10.47□□□□□ -0.73
PHACTR4-204ENST00000493669 EIF4E1BA6NMX2 242 aaKnown RBP10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 DFNA5O60443 496 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 MYO1DO94832 1006 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 MTHFD1P11586 935 aaKnown RBP10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 PBX2P40425 430 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 SRSF11Q05519 484 aaKnown RBP10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 CNTN1Q12860 1018 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 SYCE2Q6PIF2 218 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 ZBTB49Q6ZSB9 765 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 AMIGO2Q86SJ2 522 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 TMEM132CQ8N3T6 1108 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 GALNT4Q8N4A0 578 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 MFSD2AQ8NA29 543 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 OR2T12Q8NG77 320 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 OR9A1PQ8NGU1 263 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 OR4K3Q96R72 315 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 SGPP1Q9BX95 441 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 NKX2-4Q9H2Z4 354 aa10.46□□□□□ -0.73
PHACTR4-204ENST00000493669 GPR89AB7ZAQ6 455 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 ADH1BP00325 375 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 GPR89BP0CG08 455 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 OXTRP30559 389 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 CCT8P50990 548 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 PRKCQQ04759 706 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 SELPLGQ14242 412 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 ATP6AP1Q15904 470 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 AAK1Q2M2I8 961 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 TMTC4Q5T4D3 741 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 SFTPA1Q8IWL2 248 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 BIRC7Q96CA5 298 aa10.46□□□□□ -0.74
PHACTR4-204ENST00000493669 APOLD1Q96LR9 279 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms