RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SYTL1Q8IYJ3 562 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 OR1L3Q8NH93 324 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 UTP4Q969X6 686 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 MARVELD3Q96A59 401 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 IMP4Q96G21 291 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF670Q9BS34 389 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 GPR63Q9BZJ6 419 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 DDX47Q9H0S4 455 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 PPCSQ9HAB8 311 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ZDHHC18Q9NUE0 388 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 IP6K2Q9UHH9 426 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ANAPC7Q9UJX3 599 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 SNRNP200O75643 2136 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 NDC80O14777 642 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 HNRNPRO43390 633 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 KLF7O75840 302 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 MX2P20592 715 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 GRNP28799 593 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 STX2P32856 288 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 ARCN1P48444 511 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 DR1Q01658 176 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 CDK18Q07002 472 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 PPIDQ08752 370 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 TMTC4Q5T4D3 741 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 METRNLQ641Q3 311 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 HGSNATQ68CP4 663 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 DUS1LQ6P1R4 473 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 SPATA24Q86W54 205 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 OOSP2Q86WS3 158 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 TTC30BQ8N4P2 665 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 BRSK1Q8TDC3 778 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 CLIP3Q96DZ5 547 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 CEP41Q9BYV8 373 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 UNKQ9C0B0 810 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 THAP2Q9H0W7 228 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF552Q9H707 407 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 ZBTB20Q9HC78 741 aaPredicted RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 IL26Q9NPH9 171 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 IMP3Q9NV31 184 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 LGALS13Q9UHV8 139 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 SLC24A2Q9UI40 661 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 ENTPD4Q9Y227 616 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.37
HDAC3-213ENST00000492506 NF1P21359 2839 aa12.71□□□□□ -0.37
HDAC3-213ENST00000492506 MYO7BQ6PIF6 2116 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 OR6C74A6NCV1 312 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 SLC9B1P1A6NJY1 282 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 F5H423 210 aaPredicted RBP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 GPR39O43194 453 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 HNRNPCP07910 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 MSL3P1P0C860 447 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 CAV1Q03135 178 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 KLHL30Q0D2K2 578 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 DCTN2Q13561 401 aaKnown RBP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 GTF2H3Q13889 308 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 PTCHD3Q3KNS1 767 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 PDCD4Q53EL6 469 aaKnown RBP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 CFAP157Q5JU67 520 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 Q6ZS92 163 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 PEX26Q7Z412 305 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 MRGPREQ86SM8 312 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 CUZD1Q86UP6 607 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 LRRC57Q8N9N7 239 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 ST6GALNAC3Q8NDV1 305 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 DTX3LQ8TDB6 740 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 ZFPM2Q8WW38 1151 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 SLC35B4Q969S0 331 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 DGCR14Q96DF8 476 aaKnown RBP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 CCDC77Q9BR77 488 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 SOHLH2Q9NX45 425 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 SENP1Q9P0U3 644 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 AMFRQ9UKV5 643 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 DNMT3AQ9Y6K1 912 aaPredicted RBP12.7□□□□□ -0.38
HDAC3-213ENST00000492506 ITPR3Q14573 2671 aa12.7□□□□□ -0.38
HDAC3-213ENST00000492506 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 E2F3O00716 465 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PHF2O75151 1096 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PSMG1O95456 288 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 NDST3O95803 873 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 MT-CYBP00156 380 aaPredicted RBP12.69□□□□□ -0.38
HDAC3-213ENST00000492506 SHBGP04278 402 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 CYP1A2P05177 515 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 HMGCLP35914 325 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 SOX8P57073 446 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 ELOAQ14241 798 aaKnown RBP12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PDK2Q15119 407 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 PCSK7Q16549 785 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 KYNUQ16719 465 aa12.69□□□□□ -0.38
HDAC3-213ENST00000492506 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms