RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TSC22D2O75157 780 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 ARSBP15848 533 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 NUP62P37198 522 aaPredicted RBP9.46□□□□□ -0.89
VPS8-225ENST00000492449 SLC19A1P41440 591 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 MAP2K3P46734 347 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 SOX10P56693 466 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 TSC22D1Q15714 1073 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 FCRLBQ6BAA4 426 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 OR6B2Q6IFH4 312 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 GDPGP1Q6ZNW5 385 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 TMEM179Q6ZVK1 233 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 GPR149Q86SP6 731 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 LAX1Q8IWV1 398 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 KLHDC8BQ8IXV7 354 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 NIM1KQ8IY84 436 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 PGBD3Q8N328 593 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 LRRC71Q8N4P6 559 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 DNAJC22Q8N4W6 341 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 DNAAF3Q8N9W5 541 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 CLRN3Q8NCR9 226 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 C2CD4AQ8NCU7 369 aaPredicted RBP9.46□□□□□ -0.89
VPS8-225ENST00000492449 FBXO30Q8TB52 745 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 KHSRPQ92945 711 aaKnown RBP eCLIP9.46□□□□□ -0.892e-6■■■□□ 18.2
VPS8-225ENST00000492449 ZBTB45Q96K62 511 aaPredicted RBP9.46□□□□□ -0.89
VPS8-225ENST00000492449 LINC00052Q96N35 136 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 C8orf37Q96NL8 207 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 QRFPRQ96P65 431 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 RTP3Q9BQQ7 232 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 IER2Q9BTL4 223 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 TAPBPLQ9BX59 468 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 EMC7Q9NPA0 242 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 ZNF112Q9UJU3 913 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 SNX8Q9Y5X2 465 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 A0A0G2JMZ2 1700 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 LRRC37A2A6NM11 1700 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 LRRC37AA6NMS7 1700 aa9.46□□□□□ -0.89
VPS8-225ENST00000492449 SCN9AQ15858 1988 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 A0A0A6YYJ9 748 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 CLCA1A8K7I4 914 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 WISP3O95389 354 aaPredicted RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 LGI1O95970 557 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 ALDH1A1P00352 501 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 PXNP49023 591 aaPredicted RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 CCT3P49368 545 aaKnown RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 CENPAP49450 140 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 BCAT1P54687 386 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 DIO3P55073 304 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 SURF1Q15526 300 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 DUOXA2Q1HG44 320 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 HSD17B12Q53GQ0 312 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 LCN1P1Q5VSP4 162 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 SNX20Q7Z614 316 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 GALNT5Q7Z7M9 940 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 C9orf43Q8TAL5 461 aaPredicted RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 RADILQ96JH8 1075 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 NPAS1Q99742 590 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 BBS2Q9BXC9 721 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 MRPL4Q9BYD3 311 aaKnown RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 SLC19A3Q9BZV2 496 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 GHITMQ9H3K2 345 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 PIF1Q9H611 641 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 COL14A1Q05707 1796 aaKnown RBP9.46□□□□□ -0.9
VPS8-225ENST00000492449 TSC2P49815 1807 aa9.46□□□□□ -0.9
VPS8-225ENST00000492449 A0A096LPI6 279 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 KPNA5O15131 536 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 AOC2O75106 756 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 OR4F21O95013 312 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 ACSM4P0C7M7 580 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 HLA-EP13747 358 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 HK1P19367 917 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
VPS8-225ENST00000492449 RORCP51449 518 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 CREMQ03060 361 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 ZNF91Q05481 1191 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 PWP1Q13610 501 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 BAATQ14032 418 aaPredicted RBP9.45□□□□□ -0.9
VPS8-225ENST00000492449 CSHL1Q14406 222 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 VEPH1Q14D04 833 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 OR4F3Q6IEY1 312 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 MZT2BQ6NZ67 158 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 OR2T12Q8NG77 320 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 MSLNLQ96KJ4 702 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 SLC9A7Q96T83 725 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 DPYSL5Q9BPU6 564 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 P2RY13Q9BPV8 354 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 SEC22CQ9BRL7 303 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 VNN3Q9NY84 501 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 STUB1Q9UNE7 303 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 PTGDR2Q9Y5Y4 395 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 ZNF646O15015 1829 aaPredicted RBP9.45□□□□□ -0.9
VPS8-225ENST00000492449 PARP14Q460N5 1801 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 FABP7O15540 132 aa9.45□□□□□ -0.9
VPS8-225ENST00000492449 ORC5O43913 435 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms