RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ATG9BQ674R7 924 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 GDPD3Q7L5L3 318 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 HS6ST3Q8IZP7 471 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 MEIOBQ8N635 442 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 KLHL6Q8WZ60 621 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 TADA1Q96BN2 335 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 RIPOR3Q96MK2 946 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 ZYG11BQ9C0D3 744 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 MS4A12Q9NXJ0 267 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 NLKQ9UBE8 527 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 ANGPT4Q9Y264 503 aa11.03□□□□□ -0.64
CRNKL1-204ENST00000490910 SLC6A4P31645 630 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 TNFSF8P32971 234 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PIGAP37287 484 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PITX1P78337 314 aaPredicted RBP11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PTGR1Q14914 329 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 TMEM132BQ14DG7 1078 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 IFI44LQ53G44 452 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 COMMD7Q86VX2 200 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 NATD1Q8N6N6 113 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 OR6J1Q8NGC5 347 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 ZNF671Q8TAW3 534 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 PMEPA1Q969W9 287 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 C1QTNF1Q9BXJ1 281 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 NFKBIZQ9BYH8 718 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 RANBP3Q9H6Z4 567 aaPredicted RBP11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 MAN2B2Q9Y2E5 1009 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 RPL36Q9Y3U8 105 aaKnown RBP11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 GPR45Q9Y5Y3 372 aa11.02□□□□□ -0.64
CRNKL1-204ENST00000490910 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 E9PAM4 449 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 PGRMC2O15173 223 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ARIH2O95376 493 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SLC25A27O95847 323 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ATP12AP54707 1039 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 PTSQ03393 145 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CATSPEREQ5SY80 951 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ANKRD54Q6NXT1 300 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FAM92BQ6ZTR7 304 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 RHEBL1Q8TAI7 183 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ASB12Q8WXK4 309 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 NACC2Q96BF6 587 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 AARSD1Q9BTE6 412 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 DPCDQ9BVM2 203 aaPredicted RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 PDLIM7Q9NR12 457 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SLAMF8Q9P0V8 285 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 PCDHGB2Q9Y5G2 931 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SLC12A8A0AV02 714 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CLCA1A8K7I4 914 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 STX16O14662 325 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 POLR1CO15160 346 aaPredicted RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 APBA3O96018 575 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ZNF286BP0CG31 522 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 ITGAMP11215 1152 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FEN1P39748 380 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 AGTR2P50052 363 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SYTL3Q4VX76 610 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CCDC157Q569K6 752 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 RNASE12Q5GAN4 147 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 USP45Q70EL2 814 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 GALNT7Q86SF2 657 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 TAC4Q86UU9 113 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 SIDT2Q8NBJ9 832 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 GPR83Q9NYM4 423 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 A3GALT2U3KPV4 340 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 LAMB1P07942 1786 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 LCHNA4D1U4 455 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CBX4O00257 560 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 NFE2L1Q14494 772 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FGFBP1Q14512 234 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 CTF1Q16619 201 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 HSD17B12Q53GQ0 312 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 TRIM40Q6P9F5 258 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 Q8N402 240 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 LSM14AQ8ND56 463 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 OR13C4Q8NGS5 318 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 FOPNLQ96NB1 174 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 TEFMQ96QE5 360 aaKnown RBP11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 DERL2Q9GZP9 239 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 MIEF1Q9NQG6 463 aa11.02□□□□□ -0.65
CRNKL1-204ENST00000490910 A0A096LPI6 279 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 UBE2QL1A1L167 161 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 TLR5O60602 858 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 TPPPO94811 219 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 KDM4BO94953 1096 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 C1QAP02745 245 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 THP07101 528 aa11.01□□□□□ -0.65
CRNKL1-204ENST00000490910 ANXA3P12429 323 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms