RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 KIAA0408Q6ZU52 694 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 CNTN4Q8IWV2 1026 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 CPNE9Q8IYJ1 553 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 FBXO15Q8NCQ5 510 aaPredicted RBP12.64□□□□□ -0.39
SHC1-211ENST00000490667 OR2L3Q8NG85 312 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 THAP4Q8WY91 577 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 ABHD17AQ96GS6 310 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 GBP5Q96PP8 586 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 NDNQ99608 321 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 NDC1Q9BTX1 674 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 ACAT2Q9BWD1 397 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 TXLNGQ9NUQ3 528 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 TAS2R13Q9NYV9 303 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 DHCR7Q9UBM7 475 aaKnown RBP12.64□□□□□ -0.39
SHC1-211ENST00000490667 TRMT6Q9UJA5 497 aaKnown RBP12.64□□□□□ -0.39
SHC1-211ENST00000490667 TCFL5Q9UL49 500 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 SRPK3Q9UPE1 567 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 KLK4Q9Y5K2 254 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 KALRNO60229 2985 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 ATMQ13315 3056 aa12.64□□□□□ -0.39
SHC1-211ENST00000490667 FAM187AA6NFU0 413 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 ZNF839A8K0R7 811 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 C9J4A7 227 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 NDC80O14777 642 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 CTSVO60911 334 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 ALAS2P22557 587 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 MCM3P25205 808 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 CMPK1P30085 196 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 RPA3P35244 121 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 ARSFP54793 590 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 YBX1P67809 324 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 NFKB2Q00653 900 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 PDIA2Q13087 525 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 NCF4Q15080 339 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 TCTE1Q5JU00 501 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 RBM20Q5T481 1227 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 FAM69BQ5VUD6 431 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 STEAP4Q687X5 459 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 FBXO42Q6P3S6 717 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 TRMT10BQ6PF06 316 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 UBE2R2Q712K3 238 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 PIWIL4Q7Z3Z4 852 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 MAATS1Q7Z4T9 603 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 GALNT7Q86SF2 657 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 ANKMY2Q8IV38 441 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 C9orf43Q8TAL5 461 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 PROKR1Q8TCW9 393 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 EEF1AKMT1Q8WVE0 214 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 DLG3Q92796 817 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 C17orf62Q9BQA9 187 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 WDR83Q9BRX9 315 aaKnown RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 ERP44Q9BS26 406 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 DHRS4Q9BTZ2 278 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 GPN3Q9UHW5 284 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 MAN2B2Q9Y2E5 1009 aa12.63□□□□□ -0.39
SHC1-211ENST00000490667 HEMK1Q9Y5R4 338 aaPredicted RBP12.63□□□□□ -0.39
SHC1-211ENST00000490667 E7ENX8 843 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 SLC16A8O95907 504 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 CD63P08962 238 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 PLA2G2AP14555 144 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 RGS4P49798 205 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 CDKN2DP55273 166 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 TAP2Q03519 686 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 IL10RAQ13651 578 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 FRG1Q14331 258 aaKnown RBP12.62□□□□□ -0.39
SHC1-211ENST00000490667 GRM7Q14831 915 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 NKAIN1Q4KMZ8 207 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 WASHC2DQ5SRD0 308 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 PAQR3Q6TCH7 311 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 TTLL10Q6ZVT0 673 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
SHC1-211ENST00000490667 PPFIBP2Q8ND30 876 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 FBXO36Q8NEA4 188 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 MCOLN3Q8TDD5 553 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 ZNF285Q96NJ3 590 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 SELENOSQ9BQE4 189 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 DPH7Q9BTV6 452 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
SHC1-211ENST00000490667 ZNF71Q9NQZ8 489 aaPredicted RBP12.62□□□□□ -0.39
SHC1-211ENST00000490667 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
SHC1-211ENST00000490667 SLC17A6Q9P2U8 582 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 NDOR1Q9UHB4 597 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 VWA7Q9Y334 891 aa12.62□□□□□ -0.39
SHC1-211ENST00000490667 SMG1Q96Q15 3661 aaKnown RBP12.61□□□□□ -0.39
SHC1-211ENST00000490667 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 A0A0J9YVX5 310 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 OR2A25A4D2G3 310 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 E7ESA3 106 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 MKRN2OSH3BPM6 223 aa12.61□□□□□ -0.39
SHC1-211ENST00000490667 RAD51CO43502 376 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms