RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 DTWD1Q8N5C7 304 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 ENDOVQ8N8Q3 282 aaKnown RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 SLC22A18Q96BI1 424 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 ARHGAP9Q9BRR9 750 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 RAB11FIP5Q9BXF6 653 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 MOCS1Q9NZB8 636 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 WHRNQ9P202 907 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 DHCR7Q9UBM7 475 aaKnown RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 TRMT6Q9UJA5 497 aaKnown RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 KCND3Q9UK17 655 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 IKZF3Q9UKT9 509 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 PLCL2Q9UPR0 1127 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 FARSAQ9Y285 508 aaKnown RBP17.41■□□□□ 0.38
COL9A3-214ENST00000490398 ZNF462Q96JM2 2506 aa17.41■□□□□ 0.38
COL9A3-214ENST00000490398 IGKV1-8A0A0C4DH67 115 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 C21orf140B9A014 251 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 TSPAN12O95859 305 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 SYF2O95926 243 aaKnown RBP17.4■□□□□ 0.38
COL9A3-214ENST00000490398 ENO3P13929 434 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-214ENST00000490398 PTPN4P29074 926 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 PNLIPRP1P54315 467 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 POLE2P56282 527 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 CBLBQ13191 982 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 TSTA3Q13630 321 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-214ENST00000490398 SLC9A5Q14940 896 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 FRMPD2BQ6IN97 320 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 MBOAT1Q6ZNC8 495 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 KIAA0408Q6ZU52 694 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 UBE2R2Q712K3 238 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-214ENST00000490398 GPATCH11Q8N954 259 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 MAGEC3Q8TD91 643 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 N4BP2L2Q92802 583 aaPredicted RBP17.4■□□□□ 0.38
COL9A3-214ENST00000490398 SAYSD1Q9NPB0 183 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 MRFAP1Q9Y605 127 aa17.4■□□□□ 0.38
COL9A3-214ENST00000490398 E7ENX8 843 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 ZSCAN9O15535 394 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 MED26O95402 600 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 KLK3P07288 261 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 ITGAXP20702 1163 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 IMPA1P29218 277 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 SSTR1P30872 391 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 TAP2Q03519 686 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 MGAT5Q09328 741 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 FRG1Q14331 258 aaKnown RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 CRTC2Q53ET0 693 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 MAATS1Q7Z4T9 603 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 GALNT7Q86SF2 657 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 GPR135Q8IZ08 494 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 FBXO15Q8NCQ5 510 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 SMPDL3AQ92484 453 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 LINGO1Q96FE5 620 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 GBP5Q96PP8 586 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 SLC7A5P2Q9GIP4 190 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 FAM114A2Q9NRY5 505 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 SLC22A11Q9NSA0 550 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 ABCF3Q9NUQ8 709 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 TAS2R13Q9NYV9 303 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 STOX2Q9P2F5 926 aaPredicted RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 KLK4Q9Y5K2 254 aa17.39■□□□□ 0.37
COL9A3-214ENST00000490398 TLN1Q9Y490 2541 aaKnown RBP17.39■□□□□ 0.37
COL9A3-214ENST00000490398 LOC105369274A0A096LPK9 316 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 LOC102723532A0A0G2JNH3 316 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 CXorf49A8MYA2 514 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 CNOT3O75175 753 aaKnown RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 C1QAP02745 245 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 FDXRP22570 491 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 SKIV2L2P42285 1042 aaKnown RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 RPS15P62841 145 aaKnown RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 SLC7A5Q01650 507 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 MC1RQ01726 317 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 ZNF460Q14592 562 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 PHKG1Q16816 387 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 ZXDCQ2QGD7 858 aaPredicted RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 RHBDD2Q6NTF9 364 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 FBXO42Q6P3S6 717 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 OR4N4Q8N0Y3 316 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 RAB42Q8N4Z0 105 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 ZUFSPQ96AP4 578 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 ZNF285Q96NJ3 590 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 CATSPER2Q96P56 530 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 DPH7Q9BTV6 452 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 GPR87Q9BY21 358 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 IRAK4Q9NWZ3 460 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 TAC3Q9UHF0 121 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 CDC23Q9UJX2 597 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 PDE10AQ9Y233 779 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 KCNMB2Q9Y691 235 aa17.38■□□□□ 0.37
COL9A3-214ENST00000490398 FASNP49327 2511 aaKnown RBP17.38■□□□□ 0.37
COL9A3-214ENST00000490398 PCSK5Q92824 1860 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 A0A0J9YVX5 310 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 OR2A25A4D2G3 310 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 TARM1B6A8C7 271 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 ZBTB14O43829 449 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 URI1O94763 535 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 RAB40ALP0C0E4 278 aa17.37■□□□□ 0.37
COL9A3-214ENST00000490398 RPA3P35244 121 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-214ENST00000490398 CCR10P46092 362 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms