RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 NANOGNBQ7Z5D8 188 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM135Q86UB9 458 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM173Q86WV6 379 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DHFR2Q86XF0 187 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GALNT13Q8IUC8 556 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PSTKQ8IV42 348 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CNTN4Q8IWV2 1026 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ZZZ3Q8IYH5 903 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CBR4Q8N4T8 237 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DCLK2Q8N568 766 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 EMC1Q8N766 993 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 C7orf31Q8N865 590 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 VPS37AQ8NEZ2 397 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 LILRB4Q8NHJ6 448 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NTN5Q8WTR8 489 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TSPEARQ8WU66 669 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 S100ZQ8WXG8 99 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX19Q92543 992 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 LPGAT1Q92604 370 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 USP13Q92995 863 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ROPN1LQ96C74 230 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CLIP3Q96DZ5 547 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CERS2Q96G23 380 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SH3YL1Q96HL8 342 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM176AQ96HP8 235 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PAWRQ96IZ0 340 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 FAR2Q96K12 515 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ZMAT2Q96NC0 199 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RDH12Q96NR8 316 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR78Q96P69 363 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TWNKQ96RR1 684 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CPXM1Q96SM3 734 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CSF3RQ99062 836 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR22Q99680 433 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CIB1Q99828 191 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC25A23Q9BV35 468 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CALN1Q9BXU9 219 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ACE2Q9BYF1 805 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NAA50Q9GZZ1 169 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NACA2Q9H009 215 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RAB6CQ9H0N0 254 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 UPF3AQ9H1J1 476 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MRPL46Q9H2W6 279 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ABHD16BQ9H3Z7 469 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 DPEP3Q9H4B8 488 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 WDR55Q9H6Y2 383 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ATP13A3Q9H7F0 1226 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NOL11Q9H8H0 719 aaKnown RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SP140LQ9H930 580 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 CERS4Q9HA82 394 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MEAF6Q9HAF1 191 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NMRAL1Q9HBL8 299 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 LRRC4Q9HBW1 653 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 HMG20AQ9NP66 347 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 IL23AQ9NPF7 189 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 TMEM45AQ9NWC5 275 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PAK1IP1Q9NWT1 392 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MIOSQ9NXC5 875 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 QPCTLQ9NXS2 382 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SMPD3Q9NY59 655 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NPAP1Q9NZP6 1156 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 RCOR3Q9P2K3 495 aaPredicted RBP3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 ENPP5Q9UJA9 477 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PACSIN3Q9UKS6 424 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 PCDHGB1Q9Y5G3 927 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX13Q9Y5W8 968 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 A0A0C4DFX4 3053 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 NRCAMQ92823 1304 aa3.39□□□□□ -1.87
CRNKL1-203ENST00000490258 MKI67P46013 3256 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 UBE2QL1A1L167 161 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 WDR27A2RRH5 827 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM172BPA6NC97 362 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SAC3D1A6NKF1 404 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 ERI2A8K979 691 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KCNU1A8MYU2 1149 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CENPBD1B2RD01 187 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 M0QX08 132 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NME4O00746 187 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 MRASO14807 208 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KMOO15229 486 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SCO2O43819 266 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PRPSAP2O60256 369 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KDM1AO60341 852 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 BCAS1O75363 584 aaPredicted RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 GPR32O75388 356 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 TIPRLO75663 272 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SOAT2O75908 522 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 SRP72O76094 671 aaKnown RBP3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 DDHD2O94830 711 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 PIGNO95427 931 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 LY86O95711 162 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NDST3O95803 873 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 POMCP01189 267 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 C2P06681 752 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 KRT19P08727 400 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 HTR1AP08908 422 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 CKMT2P17540 419 aa3.38□□□□□ -1.87
CRNKL1-203ENST00000490258 NELFEP18615 380 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms