RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 RRAS2P62070 204 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PLAURQ03405 335 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 EMX2Q04743 252 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TNP2Q05952 138 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ELP6Q0PNE2 266 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GRIK2Q13002 908 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GRAPQ13588 217 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NFYCQ13952 458 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GBX1Q14549 363 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SEMA3AQ14563 771 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 BAK1Q16611 211 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FSCN1Q16658 493 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SYT16Q17RD7 645 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TIGD6Q17RP2 521 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 MICAQ29983 383 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 UGT3A2Q3SY77 523 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PAN2Q504Q3 1202 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HSD17B12Q53GQ0 312 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 C2orf27AQ580R0 203 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TSTD2Q5T7W7 516 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR158Q5T848 1215 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TDRD10Q5VZ19 366 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 HEATR6Q6AI08 1181 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CAPN13Q6MZZ7 669 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PLET1Q6UQ28 207 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 B3GNT9Q6UX72 402 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PAMR1Q6UXH9 720 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TMPRSS11AQ6ZMR5 421 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM183BPQ6ZVS7 135 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RNF180Q86T96 592 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM135Q86UB9 458 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CUZD1Q86UP6 607 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TSPYL5Q86VY4 417 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 KRT73Q86Y46 540 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 STX19Q8N4C7 294 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM181AQ8N9Y4 354 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TMEM161BQ8NDZ6 487 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 DUSP18Q8NEJ0 188 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 OR4D10Q8NGI6 311 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 OR6M1Q8NGM8 313 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ITFG1Q8TB96 612 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 DNAJB14Q8TBM8 379 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RAET1EQ8TD07 263 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 UTP15Q8TED0 518 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FRS2Q8WU20 508 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ZFPM2Q8WW38 1151 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ATOH1Q92858 354 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RIT1Q92963 219 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 MYDGFQ969H8 173 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PHF21AQ96BD5 680 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PYCR2Q96C36 320 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RNF31Q96EP0 1072 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ZC3HAV1LQ96H79 300 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 VPS39Q96JC1 886 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RPL10LQ96L21 214 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TEPSINQ96N21 525 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NECTIN4Q96NY8 510 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 FCRL3Q96P31 734 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR78Q96P69 363 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TBCBQ99426 244 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RIT2Q99578 217 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RAD9AQ99638 391 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GPR22Q99680 433 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NPAS1Q99742 590 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 MXRA8Q9BRK3 442 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NTPCRQ9BSD7 190 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TRMOQ9BU70 441 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 WDR18Q9BV38 432 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 SRRQ9GZT4 340 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 C11orf54Q9H0W9 315 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CATSPERZQ9NTU4 200 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 TMLHEQ9NVH6 421 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 MED9Q9NWA0 146 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 RDH8Q9NYR8 311 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 UBQLN2Q9UHD9 624 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 CYB5R1Q9UHQ9 305 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 ACAD8Q9UKU7 415 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 AGO1Q9UL18 857 aaKnown RBP4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 GINS2Q9Y248 185 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 PCNTO95613 3336 aa4.65□□□□□ -1.67
SNRNP40-206ENST00000489853 NHSQ6T4R5 1651 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 A0A0A0MRY4 1105 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LOC100506127A0A0U1RQW1 187 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 WASHC1A8K0Z3 465 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 DFFAO00273 331 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 GNB5O14775 395 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 INPPL1O15357 1258 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 CA12O43570 354 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PEX14O75381 377 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC43A1O75387 559 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SEC22BO75396 215 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PMPCBO75439 489 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 PSIP1O75475 530 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 EEDO75530 441 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 LYPLA2O95372 231 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 ALDOCP09972 364 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 FAM157BP0CG42 384 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
SNRNP40-206ENST00000489853 SELPP16109 830 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms