RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 MIPEPQ99797 713 aa12.04□□□□□ -0.48
SRRM1-216ENST00000489130 SELENOSQ9BQE4 189 aa12.04□□□□□ -0.48
SRRM1-216ENST00000489130 SLC22A11Q9NSA0 550 aa12.04□□□□□ -0.48
SRRM1-216ENST00000489130 TSR3Q9UJK0 312 aaKnown RBP12.04□□□□□ -0.48
SRRM1-216ENST00000489130 PTRH2Q9Y3E5 179 aaKnown RBP12.04□□□□□ -0.48
SRRM1-216ENST00000489130 FER1L5A0AVI2 2057 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 MYO1CO00159 1063 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 DSCR3O14972 297 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 ZNF185O15231 689 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 SRPX2O60687 465 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 CTSVO60911 334 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 SNRNP200O75643 2136 aaKnown RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 CATP04040 527 aaKnown RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 UMODP07911 640 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 ALAS2P22557 587 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 MCM3P25205 808 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 OTX2P32243 289 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 SLC1A2P43004 574 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 CTBP1Q13363 440 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 FASTKQ14296 549 aaKnown RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 GRM7Q14831 915 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 ARHGAP19Q14CB8 494 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 IGFBP7Q16270 282 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 LONRF1Q17RB8 773 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 TTLL9Q3SXZ7 439 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 RNASEH2BQ5TBB1 312 aaKnown RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 ZNF549Q6P9A3 640 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 TTLL10Q6ZVT0 673 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 RNF44Q7L0R7 432 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 HPS6Q86YV9 775 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 CALML6Q8TD86 181 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 SLCO2A1Q92959 643 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 MIB2Q96AX9 1013 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 PTERQ96BW5 349 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 SLC30A3Q99726 388 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 NUDT9Q9BW91 350 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 FBXO6Q9NRD1 293 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 CUTCQ9NTM9 273 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 G3BP2Q9UN86 482 aaKnown RBP12.03□□□□□ -0.48
SRRM1-216ENST00000489130 ZNF451Q9Y4E5 1061 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 MAD1L1Q9Y6D9 718 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 COMMD10Q9Y6G5 202 aa12.03□□□□□ -0.48
SRRM1-216ENST00000489130 OR2A25A4D2G3 310 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 NRP2O60462 931 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 ALBP02768 609 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 F7P08709 466 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 ENO3P13929 434 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 HSD17B2P37059 387 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 CD97P48960 835 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FOXL2P58012 376 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 PPP1R7Q15435 360 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FRMPD2BQ6IN97 320 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 COX15Q7KZN9 410 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 TTC29Q8NA56 475 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FBXO15Q8NCQ5 510 aaPredicted RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 SMPDL3AQ92484 453 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 NACC2Q96BF6 587 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FER1L6-AS2Q96M78 137 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 SMAD5Q99717 465 aaKnown RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 SLC26A1Q9H2B4 701 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 WDR54Q9H977 334 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
SRRM1-216ENST00000489130 GPR83Q9NYM4 423 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 ANKMY1Q9P2S6 941 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 PCYOX1Q9UHG3 505 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 PLAAQ9Y263 795 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FAM169AQ9Y6X4 670 aa12.02□□□□□ -0.49
SRRM1-216ENST00000489130 FLNBO75369 2602 aaKnown RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 A0A0J9YVX5 310 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 ZNF839A8K0R7 811 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 PEX12O00623 359 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 DPM1O60762 260 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 SORBS2O94875 1100 aaKnown RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 SLC16A8O95907 504 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 IGHEP01854 428 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 MPC1LP0DKB6 136 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 PIM1P11309 404 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 TCP1P17987 556 aaKnown RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 PGAM1P18669 254 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 CMPK1P30085 196 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 MLLT10P55197 1068 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 VSX2P58304 361 aaPredicted RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
SRRM1-216ENST00000489130 MPP1Q00013 466 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 CUL1Q13616 776 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 PTK6Q13882 451 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 CRYMQ14894 314 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 NKG7Q16617 165 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 FAM214AQ32MH5 1076 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 NADK2Q4G0N4 442 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 DCAF10Q5QP82 559 aa12.01□□□□□ -0.49
SRRM1-216ENST00000489130 WASHC2DQ5SRD0 308 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms