RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 KLK4Q9Y5K2 254 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 KLF2Q9Y5W3 355 aaPredicted RBP18.21■□□□□ 0.51
GGPS1-206ENST00000488594 MRFAP1Q9Y605 127 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 MAU2Q9Y6X3 613 aa18.21■□□□□ 0.51
GGPS1-206ENST00000488594 TRAV17A0A0B4J275 112 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 ERI2A8K979 691 aaKnown RBP18.2■□□□□ 0.5
GGPS1-206ENST00000488594 SLCO2B1O94956 709 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 GOT2P00505 430 aaKnown RBP18.2■□□□□ 0.5
GGPS1-206ENST00000488594 NAP1L1P55209 391 aaKnown RBP18.2■□□□□ 0.5
GGPS1-206ENST00000488594 KLC1Q07866 573 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 CDH17Q12864 832 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 TMED2Q15363 201 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 CCDC38Q502W7 563 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 WASHC2DQ5SRD0 308 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 METTL27Q8N6F8 245 aaPredicted RBP18.2■□□□□ 0.5
GGPS1-206ENST00000488594 TC2NQ8N9U0 490 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 DNAAF3Q8N9W5 541 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 LMNTD1Q8N9Z9 388 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 STT3BQ8TCJ2 826 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 ALG3Q92685 438 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 MIEF2Q96C03 454 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 MAGEB10Q96LZ2 347 aaPredicted RBP18.2■□□□□ 0.5
GGPS1-206ENST00000488594 C3orf18Q9UK00 162 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 DOCK10Q96BY6 2186 aa18.2■□□□□ 0.5
GGPS1-206ENST00000488594 ZGLP1P0C6A0 271 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 VSX2P58304 361 aaPredicted RBP18.19■□□□□ 0.5
GGPS1-206ENST00000488594 AARS2Q5JTZ9 985 aaKnown RBP18.19■□□□□ 0.5
GGPS1-206ENST00000488594 ATG9BQ674R7 924 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 AADACL2Q6P093 401 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 OR52K1Q8NGK4 314 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 OR4L1Q8NH43 312 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 GSDMBQ8TAX9 411 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 NR4A3Q92570 626 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 RAD51AP1Q96B01 352 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 SUCOQ9UBS9 1254 aaKnown RBP18.19■□□□□ 0.5
GGPS1-206ENST00000488594 CIDEBQ9UHD4 219 aa18.19■□□□□ 0.5
GGPS1-206ENST00000488594 IGLV3-12A0A075B6K2 115 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 NSG1A0A0A6YYJ2 146 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 PRICKLE3O43900 615 aaPredicted RBP18.18■□□□□ 0.5
GGPS1-206ENST00000488594 CTSVO60911 334 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 POU3F2P20265 443 aaPredicted RBP18.18■□□□□ 0.5
GGPS1-206ENST00000488594 TNFSF10P50591 281 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 TDGF1P3P51864 188 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 GDF10P55107 478 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 ACVR1Q04771 509 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 NAA25Q14CX7 972 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 MUM1Q2TAK8 710 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 FASTKD1Q53R41 847 aaKnown RBP18.18■□□□□ 0.5
GGPS1-206ENST00000488594 TSTD2Q5T7W7 516 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 NDUFAF7Q7L592 441 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 OR6P1Q8NGX9 317 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 HMGCLL1Q8TB92 370 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 HAS2Q92819 552 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 PEX13Q92968 403 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 SNRNP200O75643 2136 aaKnown RBP18.18■□□□□ 0.5
GGPS1-206ENST00000488594 CSMD1Q96PZ7 3565 aa18.18■□□□□ 0.5
GGPS1-206ENST00000488594 A0A1W2PQ72 361 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 BTNL10A8MVZ5 291 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 IPO7O95373 1038 aaKnown RBP18.17■□□□□ 0.5
GGPS1-206ENST00000488594 SERPINA7P05543 415 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PRR35P0CG20 571 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PTMSP20962 102 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ADRA1DP25100 572 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 AOAHP28039 575 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PTGER4P35408 488 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 SOX11P35716 441 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 KCNK10P57789 538 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PRAMEP78395 509 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.17■□□□□ 0.5
GGPS1-206ENST00000488594 MTFR2Q6P444 385 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 OR2L3Q8NG85 312 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 SLC35B2Q8TB61 432 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PSMF1Q92530 271 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 TMEM121Q9BTD3 319 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 SLC2A6Q9UGQ3 507 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ZC3H7BQ9UGR2 993 aaKnown RBP18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ANAPC5Q9UJX4 755 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 CDC14AQ9UNH5 594 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 SVILO95425 2214 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 IQCF5A8MTL0 148 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 KPNA5O15131 536 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PRPF4O43172 522 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■□□ 16.7
GGPS1-206ENST00000488594 ERVK-10P10266 1014 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 COX6A1P12074 109 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 FBLP22087 321 aaKnown RBP18.17■□□□□ 0.5
GGPS1-206ENST00000488594 CXCR2P25025 360 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 EMP3P54852 163 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 RIPPLY3P57055 190 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 AP2B1P63010 937 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 FRMPD2BQ6IN97 320 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 CNSTQ6PJW8 725 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 GFRALQ6UXV0 394 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PPP1R21Q6ZMI0 780 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 RIPOR1Q6ZS17 1223 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ZNF534Q76KX8 674 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 RNF44Q7L0R7 432 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 ZGRF1Q86YA3 2104 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 PRSS58Q8IYP2 241 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 DTWD1Q8N5C7 304 aa18.17■□□□□ 0.5
GGPS1-206ENST00000488594 TAB3Q8N5C8 712 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms