RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 RBPMS2Q6ZRY4 209 aaKnown RBP3.89□□□□□ -1.79
PTEN-204ENST00000487939 PLPPR4Q7Z2D5 763 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 MMD2Q8IY49 270 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 LGI2Q8N0V4 545 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 RYBPQ8N488 228 aaPredicted RBP3.89□□□□□ -1.79
PTEN-204ENST00000487939 ZNF614Q8N883 585 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 CCDC89Q8N998 374 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 XXYLT1Q8NBI6 393 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 GPRC5AQ8NFJ5 357 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 ROBO4Q8WZ75 1007 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 ARHGAP45Q92619 1136 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 SECISBP2LQ93073 1101 aaKnown RBP3.89□□□□□ -1.79
PTEN-204ENST00000487939 SYT15Q9BQS2 421 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 MCRIP2Q9BUT9 160 aaKnown RBP3.89□□□□□ -1.79
PTEN-204ENST00000487939 TXLNGYQ9BZA5 131 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 PRRG4Q9BZD6 226 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 RABEP2Q9H5N1 569 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 ATP13A3Q9H7F0 1226 aa3.89□□□□□ -1.79
PTEN-204ENST00000487939 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.89□□□□□ -1.79
PTEN-204ENST00000487939 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 ATP5BP06576 529 aaKnown RBP3.88□□□□□ -1.79
PTEN-204ENST00000487939 CPT2P23786 658 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 CLK1P49759 484 aaKnown RBP3.88□□□□□ -1.79
PTEN-204ENST00000487939 GSDMDP57764 484 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 VEZF1Q14119 521 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 RASA2Q15283 850 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 KYNUQ16719 465 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 TCP11X2Q5H9J9 407 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 FIP1L1Q6UN15 594 aaKnown RBP3.88□□□□□ -1.79
PTEN-204ENST00000487939 ZNF497Q6ZNH5 498 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 LACC1Q8IV20 430 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 MFN1Q8IWA4 741 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 LSMEM1Q8N8F7 131 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 TDRD5Q8NAT2 981 aaKnown RBP3.88□□□□□ -1.79
PTEN-204ENST00000487939 OR4K1Q8NGD4 311 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 OR10G8Q8NGN5 311 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 PIGBQ92521 554 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 POM121L2Q96KW2 1035 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 LRRC3BQ96PB8 259 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 FEVQ99581 238 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 CPNE1Q99829 537 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 CLEC7AQ9BXN2 247 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 ZMYND12Q9H0C1 365 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 TMEM181Q9P2C4 612 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 PRSS21Q9Y6M0 314 aa3.88□□□□□ -1.79
PTEN-204ENST00000487939 SNED1Q8TER0 1413 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 UBE2CO00762 179 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 NXPH2O95156 264 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 GGPS1O95749 300 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 EPCAMP16422 314 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 CD22P20273 847 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 KRT20P35900 424 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 RBPJQ06330 500 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 CTU2Q2VPK5 515 aaKnown RBP3.87□□□□□ -1.79
PTEN-204ENST00000487939 XKR3Q5GH77 459 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 SLC25A53Q5H9E4 307 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 WLSQ5T9L3 541 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 TMEM207Q6UWW9 146 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 STXBP4Q6ZWJ1 553 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 HOGA1Q86XE5 327 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 SLC4A11Q8NBS3 891 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 ZNF485Q8NCK3 441 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 CENPTQ96BT3 561 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 LINC00615Q96LM1 132 aaPredicted RBP3.87□□□□□ -1.79
PTEN-204ENST00000487939 ZNF599Q96NL3 588 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 MUS81Q96NY9 551 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 KRT12Q99456 494 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 TLE6Q9H808 572 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 Q9H8V8 135 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 TBC1D7Q9P0N9 293 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 RNF215Q9Y6U7 377 aa3.87□□□□□ -1.79
PTEN-204ENST00000487939 SPRY1O43609 319 aaPredicted RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 EXTL3O43909 919 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 ZFAND5O76080 213 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 CELF2O95319 508 aaKnown RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 VTNP04004 478 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 FYNP06241 537 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 CSN3P07498 182 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 TRIM49P0CI25 452 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 TRIM49CP0CI26 452 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 GP1BBP13224 206 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 DPEP1P16444 411 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 ACHEP22303 614 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 NKX2-1P43699 371 aaPredicted RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 VAMP7P51809 220 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 PAX9P55771 341 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 POLR2LP62875 67 aaKnown RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 GCNT1Q02742 428 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 NPTX1Q15818 432 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 HLA-BQ31612 363 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 TCTE1Q5JU00 501 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 BSPRYQ5W0U4 402 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 ZNF772Q68DY9 489 aaPredicted RBP3.86□□□□□ -1.79
PTEN-204ENST00000487939 UGT3A1Q6NUS8 523 aa3.86□□□□□ -1.79
PTEN-204ENST00000487939 CHST3Q7LGC8 479 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms