RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 LNPEPQ9UIQ6 1025 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 PCTPQ9UKL6 214 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 RALGAPA1Q6GYQ0 2036 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 GOLGA4Q13439 2230 aaKnown RBP16.33■□□□□ 0.2
NF1-211ENST00000487476 E2F3O00716 465 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 GDF9O60383 454 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 STK16O75716 305 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 PSMB5P28074 263 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 TBPL1P62380 186 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 PCBP2Q15366 365 aaKnown RBP eCLIP16.33■□□□□ 0.21e-7■■■■■ 45.5
NF1-211ENST00000487476 CSRP2Q16527 193 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 PDK4Q16654 411 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 ZCCHC8Q6NZY4 707 aaKnown RBP16.33■□□□□ 0.2
NF1-211ENST00000487476 RAB44Q7Z6P3 723 aaPredicted RBP16.33■□□□□ 0.2
NF1-211ENST00000487476 AMIGO1Q86WK6 493 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 OR56A3Q8NH54 315 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 PPP1R14CQ8TAE6 165 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 UBTD2Q8WUN7 234 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 DUSP23Q9BVJ7 150 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 ACAT2Q9BWD1 397 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 SHCBP1LQ9BZQ2 653 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 SRMSQ9H3Y6 488 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 GSTO2Q9H4Y5 243 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 MANSC1Q9H8J5 431 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 ZBTB26Q9HCK0 441 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 SPHK1Q9NYA1 384 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 LRIT1Q9P2V4 623 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 STK38LQ9Y2H1 464 aa16.33■□□□□ 0.2
NF1-211ENST00000487476 A0A1B0GTL3 188 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 A0A1W2PPV9 198 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 BTN3A3O00478 584 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 LYPLA1O75608 230 aaPredicted RBP16.32■□□□□ 0.2
NF1-211ENST00000487476 WDR47O94967 919 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 RPS17P08708 135 aaKnown RBP16.32■□□□□ 0.2
NF1-211ENST00000487476 RPSAP08865 295 aaKnown RBP16.32■□□□□ 0.2
NF1-211ENST00000487476 ALPPL2P10696 532 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 BST1Q10588 318 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 ANKS6Q68DC2 871 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 PRR23CQ6ZRP0 262 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 FAM20CQ8IXL6 584 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 TEX9Q8N6V9 391 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 ATL1Q8WXF7 558 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 GRAMD1AQ96CP6 724 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 TMCO1Q9UM00 188 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 SH2B3Q9UQQ2 575 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 C15orf41Q9Y2V0 281 aa16.32■□□□□ 0.2
NF1-211ENST00000487476 OR6C74A6NCV1 312 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 CHRNGP07510 517 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 TYRP1P17643 537 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 EPORP19235 508 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 PEBP1P30086 187 aaKnown RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 BIRC2Q13490 618 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 CFAP157Q5JU67 520 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 GOLGA7Q7Z5G4 137 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 THOC6Q86W42 341 aaKnown RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 ADGRF3Q8IZF5 1079 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 TCAIMQ8N3R3 496 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 ZFPM2Q8WW38 1151 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 SEMA4BQ9NPR2 832 aaPredicted RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 SPATA7Q9P0W8 599 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 OPTCQ9UBM4 332 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 PADI4Q9UM07 663 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 RHPN2P1A8MT19 583 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 UBFD1O14562 309 aaKnown RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 ANP32DO95626 131 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 SERPINE1P05121 402 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 ARHGAP19Q14CB8 494 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 DBX2Q6ZNG2 339 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 DCBLD1Q8N8Z6 715 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 OR2L8Q8NGY9 312 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 OR10G6Q8NH81 332 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 TRPC4APQ8TEL6 797 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 ZNF483Q8TF39 744 aaPredicted RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 SGPP1Q9BX95 441 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 C1QTNF3Q9BXJ4 246 aa16.31■□□□□ 0.2
NF1-211ENST00000487476 TNPO3Q9Y5L0 923 aaKnown RBP16.31■□□□□ 0.2
NF1-211ENST00000487476 K7EPI3 171 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 NPPBP16860 134 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 POLR2CP19387 275 aaPredicted RBP16.3■□□□□ 0.2
NF1-211ENST00000487476 ALDH4A1P30038 563 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 PRDX3P30048 256 aaKnown RBP16.3■□□□□ 0.2
NF1-211ENST00000487476 CLNS1AP54105 237 aaKnown RBP16.3■□□□□ 0.2
NF1-211ENST00000487476 STX3Q13277 289 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 FRMD7Q6ZUT3 714 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 Q8N9G6 341 aaPredicted RBP16.3■□□□□ 0.2
NF1-211ENST00000487476 RSC1A1Q92681 617 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 SLC38A3Q99624 504 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 SLC32A1Q9H598 525 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 TNFRSF12AQ9NP84 129 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 SLCO1B3Q9NPD5 702 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 HCN4Q9Y3Q4 1203 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 C4orf47A7E2U8 309 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 UNC5CO95185 931 aa16.3■□□□□ 0.2
NF1-211ENST00000487476 CHRM5P08912 532 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms