RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FAM114A2Q9NRY5 505 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
MSH5-216ENST00000484309 SNX7Q9UNH6 387 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 POLHQ9Y253 713 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 FARSAQ9Y285 508 aaKnown RBP11.8□□□□□ -0.52
MSH5-216ENST00000484309 COMMD10Q9Y6G5 202 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 SCN3AQ9NY46 2000 aa11.8□□□□□ -0.52
MSH5-216ENST00000484309 A0A0J9YVX5 310 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 PYCARD-AS1I3L0S3 204 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 MYO1CO00159 1063 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CTSVO60911 334 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 DNAJB5O75953 348 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CAPN1P07384 714 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 HBQ1P09105 142 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 PNLIPRP1P54315 467 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 FOXL2P58012 376 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CHAF1BQ13112 559 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CYP2A13Q16696 494 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CRTC2Q53ET0 693 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 TEDDM1Q5T9Z0 273 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 MLIPQ5VWP3 458 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 ZNF385CQ66K41 422 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 STEAP4Q687X5 459 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CYHR1Q6ZMK1 362 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 NEK10Q6ZWH5 1172 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 UBE2R2Q712K3 238 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 ZNF605Q86T29 641 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 MCATQ8IVS2 390 aaKnown RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 ZBED8Q8IZ13 594 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 METTL27Q8N6F8 245 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 GPATCH11Q8N954 259 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 OR2A1Q8NGT9 310 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 GABPB2Q8TAK5 448 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 HMGCLL1Q8TB92 370 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 EEF1AKMT1Q8WVE0 214 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 APOBEC4Q8WW27 367 aaKnown RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 C16orf45Q96MC5 204 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 GPR87Q9BY21 358 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 CHRNA10Q9GZZ6 450 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 SLC6A20Q9NP91 592 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 ZNF71Q9NQZ8 489 aaPredicted RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 TXLNGQ9NUQ3 528 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 GEMIN8Q9NWZ8 242 aaKnown RBP11.79□□□□□ -0.52
MSH5-216ENST00000484309 NDOR1Q9UHB4 597 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 TAC3Q9UHF0 121 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 ADAMTS6Q9UKP5 1117 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 MAN2B2Q9Y2E5 1009 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 KCNMB2Q9Y691 235 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 SCN2AQ99250 2005 aa11.79□□□□□ -0.52
MSH5-216ENST00000484309 ARGFXA6NJG6 315 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 C9J4A7 227 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 SMAPO00193 183 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 PIAS1O75925 651 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 SLC16A8O95907 504 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ERGP11308 486 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ENO3P13929 434 aaPredicted RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 NR1D1P20393 614 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 AGXTP21549 392 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ALAS2P22557 587 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 CMPK1P30085 196 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 RPA3P35244 121 aaPredicted RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 VSX2P58304 361 aaPredicted RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 NCF4Q15080 339 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 UGT8Q16880 541 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 COLEC12Q5KU26 742 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 CPZQ66K79 652 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 FRMPD2BQ6IN97 320 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 RHBDD2Q6NTF9 364 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 TLDC1Q6P9B6 456 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 PAQR3Q6TCH7 311 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 MBOAT1Q6ZNC8 495 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 TTLL10Q6ZVT0 673 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 PRICKLE2Q7Z3G6 844 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 SYVN1Q86TM6 617 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 PTRH1Q86Y79 214 aaKnown RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 DTWD1Q8N5C7 304 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ZNF480Q8WV37 535 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ASB11Q8WXH4 323 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 SMPDL3AQ92484 453 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 LRRC39Q96DD0 335 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 LINGO1Q96FE5 620 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 GBP5Q96PP8 586 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 SELENOSQ9BQE4 189 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 ERP44Q9BS26 406 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 DPH7Q9BTV6 452 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 NLNQ9BYT8 704 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 FAM117AQ9C073 453 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 MRPS30Q9NP92 439 aaKnown RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 TAS2R13Q9NYV9 303 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 KLHL42Q9P2K6 505 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 TCFL5Q9UL49 500 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 PSAT1Q9Y617 370 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 AP1M2Q9Y6Q5 423 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 HELZ2Q9BYK8 2649 aaKnown RBP11.78□□□□□ -0.52
MSH5-216ENST00000484309 DOCK10Q96BY6 2186 aa11.78□□□□□ -0.52
MSH5-216ENST00000484309 BOD1L1Q8NFC6 3051 aa11.77□□□□□ -0.53
MSH5-216ENST00000484309 LOC105369274A0A096LPK9 316 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms