RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 PCSK5Q92824 1860 aa9.04□□□□□ -0.96
NUP50-215ENST00000484186 HECTD1Q9ULT8 2610 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 FAM237BA0A1B0GVD1 139 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 A0A1W2PPV9 198 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 FITM1A5D6W6 292 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 KRT87PA6NCN2 255 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 SDR42E2A6NKP2 422 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 E5RI56 91 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 AGPSO00116 658 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 NRDCO43847 1150 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 CTSVO60911 334 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 PSIP1O75475 530 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 SNRNP200O75643 2136 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 IPO13O94829 963 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 ALPPP05187 535 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 MLNP12872 115 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 PKMP14618 531 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 ITGAXP20702 1163 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 MMP11P24347 488 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 PSMB5P28074 263 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 UQCRFS1P47985 274 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 VSX2P58304 361 aaPredicted RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 DHX34Q14147 1143 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 FASTKQ14296 549 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 NKG7Q16617 165 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 KLHL38Q2WGJ6 581 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 PLEKHN1Q494U1 663 aaPredicted RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 ANKRD20A4Q4UJ75 823 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 ANKRD22Q5VYY1 191 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 NEPROQ6NW34 567 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 TTC27Q6P3X3 843 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 CASC4Q6P4E1 433 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 CENPUQ71F23 418 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 COX15Q7KZN9 410 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 CILP2Q8IUL8 1156 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 TMEM151BQ8IW70 566 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 OR2A1Q8NGT9 310 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 OR9A1PQ8NGU1 263 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 MAGOHBQ96A72 148 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 FAM136AQ96C01 138 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 SLC26A1Q9H2B4 701 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 ZNF552Q9H707 407 aaPredicted RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 WDR54Q9H977 334 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 INTS10Q9NVR2 710 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 SAMD15Q9P1V8 674 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 GALPQ9UBC7 116 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
NUP50-215ENST00000484186 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 FAM169AQ9Y6X4 670 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 CCDC88CQ9P219 2028 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 FER1L5A0AVI2 2057 aa9.03□□□□□ -0.96
NUP50-215ENST00000484186 RELNP78509 3460 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 LOC105369274A0A096LPK9 316 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 LOC102723532A0A0G2JNH3 316 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 A0A0J9YVX5 310 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 HYKKA2RU49 373 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 ARHGEF33A8MVX0 844 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 MASP2O00187 686 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 USP1O94782 785 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 ERGP11308 486 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 CMPK1P30085 196 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 HSD17B2P37059 387 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 OR1D4P47884 311 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 ARHGAP19Q14CB8 494 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 ACSBG2Q5FVE4 666 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 FHL5Q5TD97 284 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 FRMPD2BQ6IN97 320 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 FBXO42Q6P3S6 717 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 IGFL3Q6UXB1 125 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 RNF44Q7L0R7 432 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 OR4N4Q8N0Y3 316 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 MCUQ8NE86 351 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 SMPDL3AQ92484 453 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 MS4A14Q96JA4 679 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 PSMG3-AS1Q96PY0 264 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 SPSB2Q99619 263 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 TRIM56Q9BRZ2 755 aaKnown RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 DPH7Q9BTV6 452 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 XAB2Q9HCS7 855 aaKnown RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 LUZP4Q9P127 313 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 KLHL42Q9P2K6 505 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 CDC23Q9UJX2 597 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 NXT1Q9UKK6 140 aaKnown RBP9.02□□□□□ -0.97
NUP50-215ENST00000484186 JRKLQ9Y4A0 524 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 DOPEY2Q9Y3R5 2298 aa9.02□□□□□ -0.97
NUP50-215ENST00000484186 ZCWPW2A0A1B0GU75 182 aa9.01□□□□□ -0.97
NUP50-215ENST00000484186 BLACEA4D250 179 aa9.01□□□□□ -0.97
NUP50-215ENST00000484186 OR2A25A4D2G3 310 aa9.01□□□□□ -0.97
NUP50-215ENST00000484186 CTAGE9A4FU28 777 aa9.01□□□□□ -0.97
NUP50-215ENST00000484186 VSTM2BA6NLU5 285 aa9.01□□□□□ -0.97
NUP50-215ENST00000484186 ZNF839A8K0R7 811 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms