RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RSL24D1Q9UHA3 163 aaKnown RBP14.05□□□□□ -0.16
CHD3-211ENST00000481999 RNF103-CHMP3A0A140T963 221 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 A0A1W2PPC1 479 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 DYTNA2CJ06 578 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 FAM149AA5PLN7 773 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 PLOD2O00469 737 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 TPST1O60507 370 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 SLC16A8O95907 504 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 PDYNP01213 254 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 HIST1H2AGP0C0S8 130 aaPredicted RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 CBSLP0DN79 551 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 CD22P20273 847 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 HIST1H2ADP20671 130 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 OXTRP30559 389 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 SLC5A2P31639 672 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 DRD3P35462 400 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 CBSP35520 551 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 TIE1P35590 1138 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 GPR1P46091 355 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 POLR2JP52435 117 aaKnown RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 TSTA3Q13630 321 aaPredicted RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 CYP51A1Q16850 503 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 TMTC4Q5T4D3 741 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 CYP20A1Q6UW02 462 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 XKR5Q6UX68 686 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 EPHX4Q8IUS5 362 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 CFAP206Q8IYR0 622 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 MRPL38Q96DV4 380 aaKnown RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 HIST1H2AHQ96KK5 128 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 HIST1H2AJQ99878 128 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 H2AFJQ9BTM1 129 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ADI1Q9BV57 179 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 SLC32A1Q9H598 525 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ATXN10Q9UBB4 475 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 MSRAQ9UJ68 235 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 FAM234BA2RU67 622 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ULK1O75385 1050 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 SLCO2B1O94956 709 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 BMP10O95393 424 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 NPPAP01160 153 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 UMPSP11172 480 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 MYF6P23409 242 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 PFN3P60673 137 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ATP6AP1Q15904 470 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 C2orf27AQ580R0 203 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 KIAA1211LQ6NV74 962 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 SUSD1Q6UWL2 747 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ERN2Q76MJ5 926 aaKnown RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 ARHGAP22Q7Z5H3 698 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 YAF2Q8IY57 180 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 KIAA2013Q8IYS2 634 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 TMEM159Q96B96 161 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 ACPTQ9BZG2 426 aa14.04□□□□□ -0.16
CHD3-211ENST00000481999 DDX18Q9NVP1 670 aaKnown RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 TUBA8Q9NY65 449 aaPredicted RBP14.04□□□□□ -0.16
CHD3-211ENST00000481999 DMDP11532 3685 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 GRXCR2A6NFK2 248 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 PDLIM1O00151 329 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 DLGAP1O14490 977 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 SCAMP1O15126 338 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 TRMUO75648 421 aaKnown RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 RASAL1O95294 804 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 LAMP2P13473 410 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 PRLHRP49683 370 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 CDK9P50750 372 aaKnown RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 RPS6KA3P51812 740 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 MERTKQ12866 999 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 NFE2L1Q14494 772 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 DNAJC14Q6Y2X3 702 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 SPRED1Q7Z699 444 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 TBC1D21Q8IYX1 336 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 C2orf73Q8N5S3 287 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 ANAPC2Q9UJX6 822 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 OAZ3Q9UMX2 235 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 CFAP20Q9Y6A4 193 aaKnown RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 A0A087WXM4 84 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 E7EQ34 232 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 MANBAO00462 879 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 ANKRD28O15084 1053 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 ATG13O75143 517 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 CLDN9O95484 217 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 ZNF8P17098 575 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 SLC6A12P48065 614 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 TAS2R38P59533 333 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 PLEKHS1Q5SXH7 462 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 IER5LQ5T953 404 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 PIP5KL1Q5T9C9 394 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 TTC33Q6PID6 262 aaPredicted RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 PAPD5Q8NDF8 572 aaKnown RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 TMIEQ8NEW7 156 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 UBTD2Q8WUN7 234 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 GFM2Q969S9 779 aaKnown RBP14.03□□□□□ -0.16
CHD3-211ENST00000481999 OR4K3Q96R72 315 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 NTMT1Q9BV86 223 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 TRPV4Q9HBA0 871 aa14.03□□□□□ -0.16
CHD3-211ENST00000481999 CD320Q9NPF0 282 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms