RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 C9IYK1 514 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ZNF217O75362 1048 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 REM1O75628 298 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 PGLSO95336 258 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CLDN7O95471 211 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ALPPP05187 535 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CST5P28325 142 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 SCAPQ12770 1279 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 TMIGD1Q6UXZ0 262 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 TCEAL8Q8IYN2 117 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 FBXO15Q8NCQ5 510 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 OR4C6Q8NH72 309 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CLPTM1LQ96KA5 538 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 GTPBP2Q9BX10 602 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ADAP2Q9NPF8 381 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 DNAJB4Q9UDY4 337 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 RAPGEFL1Q9UHV5 662 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CNOT6Q9ULM6 557 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 STX16-NPEPL1H3BU86 382 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 STX16O14662 325 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 AXIN1O15169 862 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 SLC16A5O15375 505 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ERI3O43414 337 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 LILRB3O75022 631 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CYB5AP00167 134 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 EBLN1P0CF75 366 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ALOX12P18054 663 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 AQP1P29972 269 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 RABGGTBP53611 331 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 TRIM25Q14258 630 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 FAM174BQ3ZCQ3 159 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 AMIGO2Q86SJ2 522 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 OR9A1PQ8NGU1 263 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 KLHL6Q8WZ60 621 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 OR2M4Q96R27 311 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 PTPN18Q99952 460 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 GINS4Q9BRT9 223 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 S100A14Q9HCY8 104 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 Q9N2J8 555 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 NLE1Q9NVX2 485 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 PDP1Q9P0J1 537 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 RBM7Q9Y580 266 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 H0YGN5 161 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 KAT7O95251 611 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 FADS2O95864 444 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 HMGN1P05114 100 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CD2P06729 351 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ANXA8P13928 327 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 SLC7A1P30825 629 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 NUDT1P36639 197 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 OC90Q02509 493 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 ZC3HC1Q86WB0 502 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 TRAM1L1Q8N609 369 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 MAPK15Q8TD08 544 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 LPGAT1Q92604 370 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 KIAA1191Q96A73 305 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 LENG8Q96PV6 779 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 MTERF1Q99551 399 aaKnown RBP9.25□□□□□ -0.93
GARNL3-216ENST00000481242 FEM1AQ9BSK4 669 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 CACNG4Q9UBN1 327 aa9.25□□□□□ -0.93
GARNL3-216ENST00000481242 HEPACAM2A8MVW5 462 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 M0QX08 132 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 TRIM3O75382 744 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 NME6O75414 186 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 TRMUO75648 421 aaKnown RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 CCNB2O95067 398 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 PRAMEF12O95522 483 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 ZNF823P16415 610 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 PORP16435 677 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 MNDAP41218 407 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 EEFSECP57772 596 aaKnown RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 ABATP80404 500 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 MYBPC3Q14896 1274 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 PHF19Q5T6S3 580 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 AGTRAPQ6RW13 159 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 ZNF852Q6ZMS4 543 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 GALNT6Q8NCL4 622 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 RBM15BQ8NDT2 890 aaKnown RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 LMX1AQ8TE12 382 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 PELOQ9BRX2 385 aaKnown RBP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 LRRC3Q9BY71 257 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 P2RX2Q9UBL9 471 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 IL12AP29459 219 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 RYKP34925 604 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 NCBP2P52298 156 aaKnown RBP eCLIP9.24□□□□□ -0.93
GARNL3-216ENST00000481242 THAP5Q7Z6K1 395 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 ZNF781Q8N8C0 355 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 PLA2G15Q8NCC3 412 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 TOR1AIP2Q8NFQ8 470 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 OR56A1Q8NGH5 318 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 NEK7Q8TDX7 302 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 C17orf62Q9BQA9 187 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 SPATA9Q9BWV2 254 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 MVB12BQ9H7P6 319 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 RASSF1Q9NS23 344 aa9.24□□□□□ -0.93
GARNL3-216ENST00000481242 LYARQ9NX58 379 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms