RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 IRAK4Q9NWZ3 460 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 ARL15Q9NXU5 204 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 STOX2Q9P2F5 926 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 TAC3Q9UHF0 121 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 IKZF3Q9UKT9 509 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 RARRES3Q9UL19 164 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 PCDHGA7Q9Y5G6 932 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 PRRC2CQ9Y520 2896 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TEX51A0A1B0GUA7 166 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 NCF1BA6NI72 391 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SRRM3A6NNA2 597 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 NCF1CA8MVU1 366 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 STMND1H3BQB6 276 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 KLK10O43240 276 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 RIPK2O43353 540 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 KIAA0754O94854 1291 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 NCF1P14598 390 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 IMPA1P29218 277 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 OAS2P29728 719 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 EIF2S3P41091 472 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TBPL1P62380 186 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 VSNL1P62760 191 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ACY1Q03154 408 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ILF2Q12905 390 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CSHL1Q14406 222 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TGIF1Q15583 401 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TSNQ15631 228 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ZIC1Q15915 447 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CYP2A13Q16696 494 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 KIAA1614Q5VZ46 1190 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CYB5D1Q6P9G0 228 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SBSNQ6UWP8 590 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 LRRC69Q6ZNQ3 347 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CDHR3Q6ZTQ4 885 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TRMT10CQ7L0Y3 403 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TMEM126BQ8IUX1 230 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 OR2L3Q8NG85 312 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 UBLCP1Q8WVY7 318 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SMPDL3AQ92484 453 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 EXT2Q93063 718 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TEFMQ96QE5 360 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SLC12A9Q9BXP2 914 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ATG10Q9H0Y0 220 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 POPDC3Q9HBV1 291 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SYTL2Q9HCH5 934 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SEMA5BQ9P283 1151 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CTNNAL1Q9UBT7 734 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 BTRCQ9Y297 605 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CCDC88CQ9P219 2028 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 A0A1W2PPV9 198 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 E7ENX8 843 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SLC16A5O15375 505 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 NRP2O60462 931 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 STK17BO94768 372 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TIAF1O95411 115 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SLC35E2BP0CK96 405 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 LIPCP11150 499 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ERGP11308 486 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ZNF28P17035 718 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ITPKBP27987 946 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TNFRSF8P28908 595 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CMPK1P30085 196 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 HSD17B2P37059 387 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 GRIA3P42263 894 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 MSH2P43246 934 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SERPINB8P50452 374 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 YBX1P67809 324 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TAP2Q03519 686 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 IL11RAQ14626 422 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ARHGAP19Q14CB8 494 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ZKSCAN8Q15776 578 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 PRAMEF17Q5VTA0 474 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 PWWP2BQ6NUJ5 590 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 FIGLAQ6QHK4 219 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TAOK1Q7L7X3 1001 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ADCK2Q7Z695 626 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ADAMTSL2Q86TH1 951 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TBC1D1Q86TI0 1168 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 VASH2Q86V25 355 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SPACA3Q8IXA5 215 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 OR1L3Q8NH93 324 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 HMGCLL1Q8TB92 370 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SLC44A1Q8WWI5 657 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 PYCR2Q96C36 320 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ZNF501Q96CX3 271 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TCTN2Q96GX1 697 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CCDC138Q96M89 665 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 EGFL8Q99944 293 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 ZPBPQ9BS86 351 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 DERL2Q9GZP9 239 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 MRPS30Q9NP92 439 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 CCDC177Q9NQR7 707 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 SNX15Q9NRS6 342 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 RYDENQ9NUL5 291 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 INTS7Q9NVH2 962 aaKnown RBP6.64□□□□□ -1.35
BRCA1-215ENST00000478531 PCDHGA3Q9Y5H0 932 aa6.64□□□□□ -1.35
BRCA1-215ENST00000478531 FAM208BQ5VWN6 2430 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms