RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 MRPL14Q6P1L8 145 aaKnown RBP22.48■■□□□ 1.19
C9orf3-215ENST00000478473 KIAA0408Q6ZU52 694 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 TAX1BP1Q86VP1 789 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 ZNF655Q8N720 491 aaPredicted RBP22.48■■□□□ 1.19
C9orf3-215ENST00000478473 CD200R1Q8TD46 325 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 DLG3Q92796 817 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 LRRC39Q96DD0 335 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 NDC1Q9BTX1 674 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 CCDC68Q9H2F9 335 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 PADI2Q9Y2J8 665 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 PCDHGA9Q9Y5G4 932 aaKnown RBP22.48■■□□□ 1.19
C9orf3-215ENST00000478473 KRT87PA6NCN2 255 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 TP73O15350 636 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 CTSVO60911 334 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 CEACAM4O75871 244 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 SKIV2L2P42285 1042 aaKnown RBP22.47■■□□□ 1.19
C9orf3-215ENST00000478473 TIAL1Q01085 375 aaKnown RBP eCLIP22.47■■□□□ 1.19
C9orf3-215ENST00000478473 RELAQ04206 551 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 HIBCHQ6NVY1 386 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-215ENST00000478473 GABPB2Q8TAK5 448 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-215ENST00000478473 SMPDL3AQ92484 453 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 TRIM55Q9BYV6 548 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 ANKMY1Q9P2S6 941 aa22.47■■□□□ 1.19
C9orf3-215ENST00000478473 DHCR7Q9UBM7 475 aaKnown RBP22.47■■□□□ 1.19
C9orf3-215ENST00000478473 OR2A25A4D2G3 310 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 PSMB5P28074 263 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 GABRB3P28472 473 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 MPP1Q00013 466 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 DR1Q01658 176 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 FASTKQ14296 549 aaKnown RBP22.46■■□□□ 1.19
C9orf3-215ENST00000478473 FRG1Q14331 258 aaKnown RBP22.46■■□□□ 1.19
C9orf3-215ENST00000478473 NKAIN1Q4KMZ8 207 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 RNF44Q7L0R7 432 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 PRICKLE2Q7Z3G6 844 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 IGDCC3Q8IVU1 814 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 LRRC56Q8IYG6 542 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-215ENST00000478473 CAPZA3Q96KX2 299 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 IP6K3Q96PC2 410 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 PKP4Q99569 1192 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 GPR21Q99679 349 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 ZNF71Q9NQZ8 489 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-215ENST00000478473 SLC22A11Q9NSA0 550 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 IARS2Q9NSE4 1012 aaKnown RBP22.46■■□□□ 1.19
C9orf3-215ENST00000478473 TXLNGQ9NUQ3 528 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 TP53TG5Q9Y2B4 290 aa22.46■■□□□ 1.19
C9orf3-215ENST00000478473 A0A1B0GX78 115 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 ZNF839A8K0R7 811 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 F7P08709 466 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-215ENST00000478473 ITGAXP20702 1163 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 CASRP41180 1078 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 SSPNQ14714 243 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 GRM7Q14831 915 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 STEAP4Q687X5 459 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 LRRC8EQ6NSJ5 796 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 PDIK1LQ8N165 341 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 TMEM102Q8N9M5 508 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-215ENST00000478473 OR2Y1Q8NGV0 311 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 FKBP10Q96AY3 582 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 NACC2Q96BF6 587 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 ING2Q9H160 280 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 SLC26A1Q9H2B4 701 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 TEX264Q9Y6I9 313 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 MED13Q9UHV7 2174 aa22.45■■□□□ 1.18
C9orf3-215ENST00000478473 E7ENX8 843 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 K7EM74 188 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 CNOT3O75175 753 aaKnown RBP22.44■■□□□ 1.18
C9orf3-215ENST00000478473 VPS26AO75436 327 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 SEC31AO94979 1220 aaKnown RBP22.44■■□□□ 1.18
C9orf3-215ENST00000478473 SLC16A8O95907 504 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 ALBP02768 609 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 ERVK-10P10266 1014 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 CMPK1P30085 196 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 EMP3P54852 163 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 TAP2Q03519 686 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 PRDX1Q06830 199 aaKnown RBP22.44■■□□□ 1.18
C9orf3-215ENST00000478473 MED25Q71SY5 747 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 PTRH1Q86Y79 214 aaKnown RBP22.44■■□□□ 1.18
C9orf3-215ENST00000478473 KLHL7Q8IXQ5 586 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 ZNF480Q8WV37 535 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 CERS2Q96G23 380 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 MIPEPQ99797 713 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 SELENOSQ9BQE4 189 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 WDR83Q9BRX9 315 aaKnown RBP22.44■■□□□ 1.18
C9orf3-215ENST00000478473 PCDHGB7Q9Y5F8 929 aa22.44■■□□□ 1.18
C9orf3-215ENST00000478473 DSCR3O14972 297 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 ZBTB14O43829 449 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 BANF1O75531 89 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 DNAJB5O75953 348 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 WISP1O95388 367 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 AHSGP02765 367 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 PAFAH1B1P43034 410 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 CSRP3P50461 194 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 PNLIPRP1P54315 467 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 KLRB1Q12918 225 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 CUL1Q13616 776 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 FAM214AQ32MH5 1076 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 BBS9Q3SYG4 887 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 TEDDM1Q5T9Z0 273 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 C1orf189Q5VU69 101 aa22.43■■□□□ 1.18
C9orf3-215ENST00000478473 FAM69BQ5VUD6 431 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms