RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ELMO1Q92556 727 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
COL4A5-204ENST00000477429 CHP1Q99653 195 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 HEMGNQ9BXL5 484 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 GSX1Q9H4S2 264 aaPredicted RBP9.3□□□□□ -0.92
COL4A5-204ENST00000477429 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
COL4A5-204ENST00000477429 ENAMQ9NRM1 1142 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 SMARCAL1Q9NZC9 954 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 SUCOQ9UBS9 1254 aaKnown RBP9.3□□□□□ -0.92
COL4A5-204ENST00000477429 C3orf18Q9UK00 162 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 TFR2Q9UP52 801 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 ZNF835Q9Y2P0 537 aa9.3□□□□□ -0.92
COL4A5-204ENST00000477429 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
COL4A5-204ENST00000477429 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 IGHV1-45A0A0A0MS14 117 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 TRAV17A0A0B4J275 112 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 OR2W5A6NFC9 320 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 IQCF5A8MTL0 148 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CFAP99D6REC4 459 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 AP2A1O95782 977 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 SERPINC1P01008 464 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 RALBP11234 206 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 SSTR2P30874 369 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CCR7P32248 378 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 ARSFP54793 590 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 GEMP55040 296 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CSNK1G2P78368 415 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 HSF1Q00613 529 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 SEMA3AQ14563 771 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 PCOLCEQ15113 449 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 SYT16Q17RD7 645 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 ANKRD20A2Q5SQ80 823 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 ANKRD20A1Q5TYW2 823 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 ANKRD20A3Q5VUR7 823 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 IRAK1BP1Q5VVH5 260 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 RPTNQ6XPR3 784 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 LUZP1Q86V48 1076 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 KBTBD2Q8IY47 623 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CCDC110Q8TBZ0 833 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 DENND1AQ8TEH3 1009 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 KRT35Q92764 455 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 P3H4Q92791 437 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 DLG3Q92796 817 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CDKN2AIPNLQ96HQ2 116 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 NPAS2Q99743 824 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 TREX2Q9BQ50 279 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 NLE1Q9NVX2 485 aaPredicted RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 RUVBL2Q9Y230 463 aaKnown RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 R3HDM2Q9Y2K5 976 aaKnown RBP9.29□□□□□ -0.92
COL4A5-204ENST00000477429 MEMO1Q9Y316 297 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 HRH3Q9Y5N1 445 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 CPAMD8Q8IZJ3 1885 aa9.29□□□□□ -0.92
COL4A5-204ENST00000477429 IGLV3-12A0A075B6K2 115 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 IGHV3-20A0A0C4DH32 117 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 A0A0U1RQJ8 604 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 A0A1W2PPV9 198 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 A0A1W2PQ72 361 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 HYKKA2RU49 373 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 H7C0S8 307 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 MAP2K7O14733 419 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 USP1O94782 785 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 RASAL1O95294 804 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 CLDN14O95500 239 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 CRTAMO95727 393 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 SERPINA7P05543 415 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 CD9P21926 228 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 FOXN2P32314 431 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 RAB28P51157 221 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NR0B1P51843 470 aaKnown RBP9.28□□□□□ -0.92
COL4A5-204ENST00000477429 GRM7Q14831 915 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 GPR33Q49SQ1 333 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 TFDP3Q5H9I0 405 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 RNFT1Q5M7Z0 435 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 AADACL2Q6P093 401 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 XKRXQ6PP77 449 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NDUFAF7Q7L592 441 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NLRP9Q7RTR0 991 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 CEP97Q8IW35 865 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 KLHDC8BQ8IXV7 354 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 AMER3Q8N944 861 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 MIEF2Q96C03 454 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 C14orf79Q96F83 325 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 IMMP1LQ96LU5 166 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 SIGLEC12Q96PQ1 595 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 VAT1Q99536 393 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 TBL1YQ9BQ87 522 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 ENKD1Q9H0I2 346 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 ARNT2Q9HBZ2 717 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 ZNF304Q9HCX3 659 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 SLC2A6Q9UGQ3 507 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NXT1Q9UKK6 140 aaKnown RBP9.28□□□□□ -0.92
COL4A5-204ENST00000477429 TRHDEQ9UKU6 1024 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 LUC7L2Q9Y383 392 aaKnown RBP9.28□□□□□ -0.92
COL4A5-204ENST00000477429 NFS1Q9Y697 457 aa9.28□□□□□ -0.92
COL4A5-204ENST00000477429 TGP01266 2768 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms