RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CEACAM4O75871 244 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 AP2A2O94973 939 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TJP3O95049 919 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 FTH1P02794 183 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 RPN2P04844 631 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 GNLYP22749 145 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 CYLC1P35663 651 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 FOLR3P41439 243 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 MAGEA1P43355 309 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 INPP5JQ15735 1006 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TAZQ16635 292 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TLDC1Q6P9B6 456 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 FAM199XQ6PEV8 388 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF517Q6ZMY9 492 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 AMIGO1Q86WK6 493 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 SYTL1Q8IYJ3 562 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 ZADH2Q8N4Q0 377 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 OR4K2Q8NGD2 314 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 UBE2FQ969M7 185 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 NACC2Q96BF6 587 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 C1orf159Q96HA4 380 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 AP1M1Q9BXS5 423 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 AGPAT4Q9NRZ5 378 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 INTS7Q9NVH2 962 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TMPRSS11EQ9UL52 423 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 ALG6Q9Y672 507 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 CFAP20Q9Y6A4 193 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 hCG_1818297A0A087WSY0 165 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 MACROD2A1Z1Q3 448 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 CCDC66A2RUB6 948 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 LIN7AO14910 233 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 ZNF185O15231 689 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 MFAP3LO75121 409 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 IGLV1-40P01703 118 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 FSTP19883 344 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 ITGAXP20702 1163 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 PRDX3P30048 256 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 KPNA2P52292 529 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 NAP1L1P55209 391 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 PER3P56645 1201 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 GPS2Q13227 327 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 NCF4Q15080 339 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 KYNUQ16719 465 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 PLEKHS1Q5SXH7 462 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 RNF187Q5TA31 235 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 C11orf63Q6NUN7 778 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 JMJD6Q6NYC1 403 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 DARS2Q6PI48 645 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 FAM83HQ6ZRV2 1179 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 C22orf34Q6ZV56 151 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 BBS12Q6ZW61 710 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TAS2R42Q7RTR8 314 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 TMEM135Q86UB9 458 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 CPNE8Q86YQ8 564 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 NXPE1Q8N323 547 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 RAB42Q8N4Z0 105 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 SLC22A18Q96BI1 424 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 COX4I2Q96KJ9 171 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 COG4Q9H9E3 785 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 SPTLC3Q9NUV7 552 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 SF3B6Q9Y3B4 125 aaKnown RBP7.02□□□□□ -1.29
BRCA1-214ENST00000477152 MRFAP1Q9Y605 127 aa7.02□□□□□ -1.29
BRCA1-214ENST00000477152 DNAJB5O75953 348 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 OR2B3O76000 313 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 SORBS2O94875 1100 aaKnown RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 AGTP01019 485 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 PROCP04070 461 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 ARSFP54793 590 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 PPP1CAP62136 330 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 RPS18P62269 152 aaKnown RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 DCDP81605 110 aaKnown RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 IL10RAQ13651 578 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 NOMO1Q15155 1222 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 CYP2A13Q16696 494 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 P3H1Q32P28 736 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 NADK2Q4G0N4 442 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 SYTL3Q4VX76 610 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 ZRANB3Q5FWF4 1079 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TTC23LQ6PF05 361 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 RANBP10Q6VN20 620 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 B4GALNT4Q76KP1 1039 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 LINC00523Q86TU6 105 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 VSTM4Q8IW00 320 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TBC1D21Q8IYX1 336 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 GSDMBQ8TAX9 411 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TFGQ92734 400 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 PTERQ96BW5 349 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 OXNAD1Q96HP4 312 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 RMDN2Q96LZ7 410 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 C5orf34Q96MH7 638 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 SMAD5Q99717 465 aaKnown RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TBL1YQ9BQ87 522 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 NDC1Q9BTX1 674 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 TLR10Q9BXR5 811 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 CHRNA10Q9GZZ6 450 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 ILKAPQ9H0C8 392 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-214ENST00000477152 CASS4Q9NQ75 786 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 IL1RAPL1Q9NZN1 696 aa7.01□□□□□ -1.29
BRCA1-214ENST00000477152 IFT80Q9P2H3 777 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms