RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 GBP5Q96PP8 586 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 PKP4Q99569 1192 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 GPR21Q99679 349 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 C17orf62Q9BQA9 187 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 TRIM51Q9BSJ1 452 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 AARSD1Q9BTE6 412 aaKnown RBP10.74□□□□□ -0.69
CKS1B-206ENST00000474215 DHRS4Q9BTZ2 278 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF71Q9NQZ8 489 aaPredicted RBP10.74□□□□□ -0.69
CKS1B-206ENST00000474215 ENAMQ9NRM1 1142 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 TXLNGQ9NUQ3 528 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 DHCR7Q9UBM7 475 aaKnown RBP10.74□□□□□ -0.69
CKS1B-206ENST00000474215 ZC3H7BQ9UGR2 993 aaKnown RBP10.74□□□□□ -0.69
CKS1B-206ENST00000474215 SNX7Q9UNH6 387 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 KLK4Q9Y5K2 254 aa10.74□□□□□ -0.69
CKS1B-206ENST00000474215 HELZ2Q9BYK8 2649 aaKnown RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF839A8K0R7 811 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 EFCAB8A8MWE9 144 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 EIF3FO00303 357 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ZBTB14O43829 449 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 SRPX2O60687 465 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CTSVO60911 334 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 RFPL1O75677 317 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 KLF7O75840 302 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 SLC16A8O95907 504 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 AHSGP02765 367 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CD63P08962 238 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ERGP11308 486 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ALAS2P22557 587 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 GABRB3P28472 473 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CMPK1P30085 196 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 RPA3P35244 121 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 GCGRP47871 477 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CARSP49589 748 aaKnown RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ITGA8P53708 1063 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 PNLIPRP1P54315 467 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ARSFP54793 590 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ARL4CP56559 192 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 GRM7Q14831 915 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 NAA25Q14CX7 972 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 HIF1AQ16665 826 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 NKAIN1Q4KMZ8 207 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TCTE1Q5JU00 501 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 FAM69BQ5VUD6 431 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 MLIPQ5VWP3 458 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 UGT3A1Q6NUS8 523 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ATG14Q6ZNE5 492 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 KIAA0408Q6ZU52 694 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 PTRH1Q86Y79 214 aaKnown RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CNTN4Q8IWV2 1026 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CPNE9Q8IYJ1 553 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ADAMTS17Q8TE56 1095 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 DLG3Q92796 817 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 CERS2Q96G23 380 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF285Q96NJ3 590 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 KRT12Q99456 494 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 SELENOSQ9BQE4 189 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 DPH7Q9BTV6 452 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 ACAT2Q9BWD1 397 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TRIM31Q9BZY9 425 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 PLAC1Q9HBJ0 212 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 PPANQ9NQ55 473 aaKnown RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TAS2R13Q9NYV9 303 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 IFT80Q9P2H3 777 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 GPN3Q9UHW5 284 aaPredicted RBP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TLK1Q9UKI8 766 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 PADI2Q9Y2J8 665 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TEX264Q9Y6I9 313 aa10.73□□□□□ -0.69
CKS1B-206ENST00000474215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
CKS1B-206ENST00000474215 TENM4Q6N022 2769 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 COL6A6A6NMZ7 2263 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TP73O15350 636 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 MCM3P25205 808 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 YBX1P67809 324 aaKnown RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TIAL1Q01085 375 aaKnown RBP eCLIP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 FAM214AQ32MH5 1076 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 LACTB2Q53H82 288 aaPredicted RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TEDDM1Q5T9Z0 273 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 YOD1Q5VVQ6 348 aaPredicted RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 LRRC8EQ6NSJ5 796 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TCTN3Q6NUS6 607 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 FBXO42Q6P3S6 717 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 SUSD1Q6UWL2 747 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TTLL10Q6ZVT0 673 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 UBE2R2Q712K3 238 aaPredicted RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 PIWIL4Q7Z3Z4 852 aaKnown RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 GALNT7Q86SF2 657 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 ZNF480Q8WV37 535 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 EEF1AKMT1Q8WVE0 214 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 CFAP36Q96G28 342 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 NDNQ99608 321 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TRIM55Q9BYV6 548 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 ING2Q9H160 280 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TRMT6Q9UJA5 497 aaKnown RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 CHMP2BQ9UQN3 213 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TP53TG5Q9Y2B4 290 aa10.72□□□□□ -0.69
CKS1B-206ENST00000474215 TLN1Q9Y490 2541 aaKnown RBP10.72□□□□□ -0.69
CKS1B-206ENST00000474215 LOC105369274A0A096LPK9 316 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms