RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
COPS7B-219ENST00000474042 RAB6BQ9NRW1 208 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 AGPAT4Q9NRZ5 378 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 SEMA3GQ9NS98 782 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 TREX1Q9NSU2 369 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 IL1RAPL1Q9NZN1 696 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 GNPTGQ9UJJ9 305 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 SLC39A10Q9ULF5 831 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 FAM169AQ9Y6X4 670 aa12.81□□□□□ -0.36
COPS7B-219ENST00000474042 DIDO1Q9BTC0 2240 aaKnown RBP12.81□□□□□ -0.36
COPS7B-219ENST00000474042 CENPEQ02224 2701 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 A0A1W2PPV9 198 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 KRT87PA6NCN2 255 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 E7EVH7 732 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 NRP2O60462 931 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 ETS1P14921 441 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 RPS3P23396 243 aaKnown RBP eCLIP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 OR1D4P47884 311 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 Q0VFX4 171 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 GBX1Q14549 363 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 ZNF169Q14929 603 aaPredicted RBP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 SF1Q15637 639 aaKnown RBP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 RBBP7Q16576 425 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 CCSMST1Q4G0I0 132 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 SEL1L2Q5TEA6 688 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 AGAP7PQ5VUJ5 663 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 FRMPD2BQ6IN97 320 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 SHISA6Q6ZSJ9 500 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 PRUNE1Q86TP1 453 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 TICAM1Q8IUC6 712 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 MPP5Q8N3R9 675 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 METTL27Q8N6F8 245 aaPredicted RBP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 OR2L3Q8NG85 312 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 ZUFSPQ96AP4 578 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 RAD51AP1Q96B01 352 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 AGAP4Q96P64 663 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 PANX3Q96QZ0 392 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 TRIM56Q9BRZ2 755 aaKnown RBP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 EPS8L2Q9H6S3 715 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
COPS7B-219ENST00000474042 NFS1Q9Y697 457 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 HEATR5BQ9P2D3 2071 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 ZGRF1Q86YA3 2104 aa12.8□□□□□ -0.36
COPS7B-219ENST00000474042 IGLV3-12A0A075B6K2 115 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 A0A1W2PQ72 361 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 OR2A25A4D2G3 310 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CD3EAPO15446 510 aaKnown RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 SRPX2O60687 465 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 APRTP07741 180 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 ERGP11308 486 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 VSX2P58304 361 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 FAM214AQ32MH5 1076 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 PCID2Q5JVF3 399 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 IRAK1BP1Q5VVH5 260 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 PTRHD1Q6GMV3 140 aaKnown RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 LRRC6Q86X45 466 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 SLC13A5Q86YT5 568 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 PARP9Q8IXQ6 854 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 TXLNBQ8N3L3 684 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 OR2A1Q8NGT9 310 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 GRHL3Q8TE85 626 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 C1orf54Q8WWF1 131 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 VPS50Q96JG6 964 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 C10orf90Q96M02 699 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 MIPEPQ99797 713 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 MESP1Q9BRJ9 268 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CRB3Q9BUF7 120 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CHRAC1Q9NRG0 131 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 SPATA7Q9P0W8 599 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 PAK5Q9P286 719 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 ZNF148Q9UQR1 794 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 RUVBL2Q9Y230 463 aaKnown RBP12.79□□□□□ -0.36
COPS7B-219ENST00000474042 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CRYBG3Q68DQ2 2970 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CREBBPQ92793 2442 aa12.79□□□□□ -0.36
COPS7B-219ENST00000474042 CELSR2Q9HCU4 2923 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 SVILO95425 2214 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 HYKKA2RU49 373 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 KPNA5O15131 536 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 HPP00738 406 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 EDN3P14138 238 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 ARNTP27540 789 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 ATP5DP30049 168 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 CCNFP41002 786 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 CARSP49589 748 aaKnown RBP12.78□□□□□ -0.36
COPS7B-219ENST00000474042 CRADDP78560 199 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 KLC1Q07866 573 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 MFAP5Q13361 173 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
COPS7B-219ENST00000474042 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 WASHC2DQ5SRD0 308 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 TTC23LQ6PF05 361 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 RAB42Q8N4Z0 105 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 CCDC89Q8N998 374 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 DNAJB14Q8TBM8 379 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 STT3BQ8TCJ2 826 aa12.78□□□□□ -0.36
COPS7B-219ENST00000474042 FAR1Q8WVX9 515 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms