RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 STK39Q9UEW8 545 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 NDRG3Q9UGV2 375 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 RCOR1Q9UKL0 485 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 CCL27Q9Y4X3 112 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 PCDHGA1Q9Y5H4 931 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 POMT1Q9Y6A1 747 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 ATXN2Q99700 1313 aaKnown RBP2.31□□□□□ -2.04
CALD1-216ENST00000473714 TLN2Q9Y4G6 2542 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 EVPLQ92817 2033 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 TRAV34A0A0B4J273 112 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 A0A1W2PQF6 199 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 MYBPHLA2RUH7 354 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CGB1A6NKQ9 187 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 HSPB2A8KAH6 182 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 A8MXE2 369 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 FOXO6A8MYZ6 492 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 KDM4EB2RXH2 506 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 F8W810 466 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 STMND1H3BQB6 276 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 EBAG9O00559 213 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 HSPB6O14558 160 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 FLRT2O43155 660 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZC3H11AO75152 810 aaKnown RBP eCLIP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PROP1O75360 226 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 APBB3O95704 486 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 TRUB2O95900 331 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 FTCDO95954 541 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 GLUD1P00367 558 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LDLRP01130 860 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PTMAP06454 111 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 TUBBP07437 444 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CYP2A6P11509 494 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 MMP9P14780 707 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PSMC3P17980 439 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CD58P19256 250 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ATP5F1P24539 256 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 HOXA13P31271 388 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 HSPA4P34932 840 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 GP5P40197 560 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PTGER3P43115 390 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 UQCRFS1P47985 274 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CENPAP49450 140 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 RARRES1P49788 294 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 BMXP51813 675 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZNF41P51814 821 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PPP5CP53041 499 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CDH12P55289 794 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 DYNLL1P63167 89 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 TUBA4AP68366 448 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 GHRHRQ02643 423 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 UBXN1Q04323 297 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 SLC18A2Q05940 514 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 RUNX1T1Q06455 604 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 MYBPC2Q14324 1141 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 DLG2Q15700 870 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 HSPB2Q16082 182 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CDC37Q16543 378 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 SRSF7Q16629 238 aaKnown RBP eCLIP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PNLIPRP3Q17RR3 467 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ALG11Q2TAA5 492 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 USP41Q3LFD5 358 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ESCO2Q56NI9 601 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZNF805Q5CZA5 627 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZNF628Q5EBL2 1059 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CXorf66Q5JRM2 361 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 ENTPD8Q5MY95 495 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ARMC4Q5T2S8 1044 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LRIF1Q5T3J3 769 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LYSMD4Q5XG99 296 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 GGNBP1Q5YKI7 109 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 HEPHL1Q6MZM0 1159 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CAVIN1Q6NZI2 390 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 METTL2BQ6P1Q9 378 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 C11orf88Q6PI97 169 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZNF517Q6ZMY9 492 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 SEPT14Q6ZU15 432 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 SLC24A5Q71RS6 500 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LPCAT2Q7L5N7 544 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PLPPR4Q7Z2D5 763 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CCDC190Q86UF4 302 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 RNF168Q8IYW5 571 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 DSELQ8IZU8 1212 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 SIX6OS1Q8N1H7 587 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LRRC43Q8N309 656 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 ZNF713Q8N859 430 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 IQUBQ8NA54 791 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 PPTC7Q8NI37 304 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CTCFLQ8NI51 663 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 GDAP1Q8TB36 358 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 DNAAF4Q8WXU2 420 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 LPGAT1Q92604 370 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 CCDC47Q96A33 483 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 HES6Q96HZ4 224 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 METTL2AQ96IZ6 378 aaKnown RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 PDLIM2Q96JY6 352 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 UROC1Q96N76 676 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 OR2A14Q96R47 310 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 SEPT5Q99719 369 aaPredicted RBP2.3□□□□□ -2.04
CALD1-216ENST00000473714 HGH1Q9BTY7 390 aa2.3□□□□□ -2.04
CALD1-216ENST00000473714 NUP85Q9BW27 656 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms