RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CCT6BQ92526 530 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 SH3KBP1Q96B97 665 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 SKA1Q96BD8 255 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 CXorf40BQ96DE9 158 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 MTFMTQ96DP5 389 aaKnown RBP10.4□□□□□ -0.74
SP140-208ENST00000473711 C19orf60Q96EN9 201 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 PRR11Q96HE9 360 aaPredicted RBP10.4□□□□□ -0.74
SP140-208ENST00000473711 C3orf30Q96M34 536 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 SPSB2Q99619 263 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 SGPP1Q9BX95 441 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 NUSAP1Q9BXS6 441 aaKnown RBP10.4□□□□□ -0.74
SP140-208ENST00000473711 TUBB1Q9H4B7 451 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 TCF7L2Q9NQB0 619 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 SPATA7Q9P0W8 599 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 APOBEC3BQ9UH17 382 aaKnown RBP10.4□□□□□ -0.74
SP140-208ENST00000473711 TRPS1Q9UHF7 1281 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 ZFP69BQ9UJL9 534 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 DYRK1BQ9Y463 629 aa10.4□□□□□ -0.74
SP140-208ENST00000473711 ZFC3H1O60293 1989 aaKnown RBP10.39□□□□□ -0.75
SP140-208ENST00000473711 ATXN2Q99700 1313 aaKnown RBP10.39□□□□□ -0.75
SP140-208ENST00000473711 PIEZO1Q92508 2521 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ATP6AP2A0A1C7CYW4 349 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 A6NCN8 305 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ZNF839A8K0R7 811 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 E7EQ34 232 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 E9PBE3 544 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 VILLO15195 856 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 KLHL41O60662 606 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 CCDC22O60826 627 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ATP6AP2O75787 350 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ENO1P06733 434 aaKnown RBP10.39□□□□□ -0.75
SP140-208ENST00000473711 ERGP11308 486 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 F3P13726 295 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 NME1P15531 152 aaKnown RBP10.39□□□□□ -0.75
SP140-208ENST00000473711 NPPBP16860 134 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 HTR6P50406 440 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 INHBCP55103 352 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 IRF8Q02556 426 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 DOC2AQ14183 400 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ARHGAP19Q14CB8 494 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 CPSF6Q16630 551 aaKnown RBP eCLIP10.39□□□□□ -0.75
SP140-208ENST00000473711 SGO1Q5FBB7 561 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 XKR6Q5GH73 641 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 LYSMD4Q5XG99 296 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 IYDQ6PHW0 289 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 IL27RAQ6UWB1 636 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 CCDC121Q6ZUS5 278 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 CEP68Q76N32 757 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 C11orf74Q86VG3 221 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 RAB42Q8N4Z0 105 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 FBXL6Q8N531 539 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 LMX1AQ8TE12 382 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 PATE1Q8WXA2 126 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ERP27Q96DN0 273 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 MENTQ9BUN1 341 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 LRRC61Q9BV99 259 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 NMUR2Q9GZQ4 415 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 CCDC177Q9NQR7 707 aaPredicted RBP10.39□□□□□ -0.75
SP140-208ENST00000473711 FBXO4Q9UKT5 387 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 KCNE2Q9Y6J6 123 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 TECTAO75443 2155 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
SP140-208ENST00000473711 KCNE1BA0A087WTH5 132 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 A0A1B0GVT2 93 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 MANBAO00462 879 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 UBOX5O94941 541 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 VIPP01282 170 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 SERPINA6P08185 405 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 CCND1P24385 295 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
SP140-208ENST00000473711 NDUFS1P28331 727 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 AVPR2P30518 371 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 PKLRP30613 574 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 AFF3P51826 1226 aaKnown RBP10.38□□□□□ -0.75
SP140-208ENST00000473711 UBAP2LQ14157 1087 aaKnown RBP10.38□□□□□ -0.75
SP140-208ENST00000473711 ABRAXAS2Q15018 415 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 TEAD4Q15561 434 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 ZRSR2Q15696 482 aaKnown RBP10.38□□□□□ -0.75
SP140-208ENST00000473711 PLK5Q496M5 336 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 CATSPEREQ5SY80 951 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 PRAMEF13Q5VWM6 474 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 LIPJQ5W064 366 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 TMEM198Q66K66 360 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 LCTLQ6UWM7 567 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 SLCO4C1Q6ZQN7 724 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 LARP4Q71RC2 724 aaKnown RBP eCLIP10.38□□□□□ -0.75
SP140-208ENST00000473711 TRIM48Q8IWZ4 208 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 L3MBTL4Q8NA19 623 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 OR4E2Q8NGC2 313 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 CEP70Q8NHQ1 597 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 ACTRT2Q8TDY3 377 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 SLC5A11Q8WWX8 675 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 SMPDL3AQ92484 453 aa10.38□□□□□ -0.75
SP140-208ENST00000473711 NEIL2Q969S2 332 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms