RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 MYBPC3Q14896 1274 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 INPP5JQ15735 1006 aaPredicted RBP14.65□□□□□ -0.06
VTI1A-203ENST00000472892 FAM214AQ32MH5 1076 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 VWA5B1Q5TIE3 1220 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 ANKRD22Q5VYY1 191 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 SLC6A19Q695T7 634 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 NEPROQ6NW34 567 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 TTC27Q6P3X3 843 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 CNSTQ6PJW8 725 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 IGFL3Q6UXB1 125 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 CENPUQ71F23 418 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 CILP2Q8IUL8 1156 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 RASGEF1CQ8N431 466 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 OR2L3Q8NG85 312 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 SELENOSQ9BQE4 189 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 ZNF552Q9H707 407 aaPredicted RBP14.65□□□□□ -0.06
VTI1A-203ENST00000472892 WDR54Q9H977 334 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 SLAMF7Q9NQ25 335 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 RYDENQ9NUL5 291 aaKnown RBP14.65□□□□□ -0.06
VTI1A-203ENST00000472892 IL1RAPL1Q9NZN1 696 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 SPATA7Q9P0W8 599 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 GALPQ9UBC7 116 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 CRYL1Q9Y2S2 319 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 LRRK2Q5S007 2527 aa14.65□□□□□ -0.06
VTI1A-203ENST00000472892 FAM237BA0A1B0GVD1 139 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 KRT87PA6NCN2 255 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 AGPSO00116 658 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 KLHL41O60662 606 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 KRT14P02533 472 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 MLNP12872 115 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 PKMP14618 531 aaKnown RBP14.64□□□□□ -0.07
VTI1A-203ENST00000472892 CHRM3P20309 590 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 GNLYP22749 145 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 MMP11P24347 488 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 VARSP26640 1264 aaKnown RBP14.64□□□□□ -0.07
VTI1A-203ENST00000472892 PSMB5P28074 263 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 UQCRFS1P47985 274 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 VPS41P49754 854 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 NKG7Q16617 165 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 WASHC2DQ5SRD0 308 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 COX15Q7KZN9 410 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 TTC29Q8NA56 475 aaPredicted RBP14.64□□□□□ -0.07
VTI1A-203ENST00000472892 MCUQ8NE86 351 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 MAGOHBQ96A72 148 aaKnown RBP14.64□□□□□ -0.07
VTI1A-203ENST00000472892 PSMG3-AS1Q96PY0 264 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 MIPEPQ99797 713 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 ATP13A2Q9NQ11 1180 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 VPS9D1Q9Y2B5 631 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 NEU2Q9Y3R4 380 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 DOPEY2Q9Y3R5 2298 aa14.64□□□□□ -0.07
VTI1A-203ENST00000472892 HYKKA2RU49 373 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 SDR42E2A6NKP2 422 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 VSTM2BA6NLU5 285 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 MASP2O00187 686 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 PSIP1O75475 530 aaKnown RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 ALPPP05187 535 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 ERGP11308 486 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 PAMP19021 973 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 TERF1P54274 439 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 VSX2P58304 361 aaPredicted RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 FASTKQ14296 549 aaKnown RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 CYP1B1Q16678 543 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 PLEKHN1Q494U1 663 aaPredicted RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 ANKRD20A4Q4UJ75 823 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 ACSBG2Q5FVE4 666 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 FRMPD2BQ6IN97 320 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 CASC4Q6P4E1 433 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 OR9A1PQ8NGU1 263 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 FAM136AQ96C01 138 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 MS4A14Q96JA4 679 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 PBKQ96KB5 322 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 SPSB2Q99619 263 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 TRIM56Q9BRZ2 755 aaKnown RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 INTS10Q9NVR2 710 aaKnown RBP14.63□□□□□ -0.07
VTI1A-203ENST00000472892 LUZP4Q9P127 313 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 JRKLQ9Y4A0 524 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 CCDC88CQ9P219 2028 aa14.63□□□□□ -0.07
VTI1A-203ENST00000472892 MAST4O15021 2626 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 LOC105369274A0A096LPK9 316 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 LOC102723532A0A0G2JNH3 316 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 A0A0J9YVX5 310 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 OR2A25A4D2G3 310 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 ARHGEF33A8MVX0 844 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 MYO1CO00159 1063 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 IPO13O94829 963 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 GP1BBP13224 206 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 COILP38432 576 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 OR1D4P47884 311 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 CLCN7P51798 805 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 YBX1P67809 324 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 AIMP2Q13155 320 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 DHX34Q14147 1143 aaKnown RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 ARHGAP19Q14CB8 494 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 KLHL38Q2WGJ6 581 aa14.62□□□□□ -0.07
VTI1A-203ENST00000472892 PRR30Q53SZ7 412 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 LCE2DQ5TA82 110 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-203ENST00000472892 NEK10Q6ZWH5 1172 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms