RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ONECUT2O95948 504 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ALBP02768 609 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ESR1P03372 595 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ALPPP05187 535 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 CHRM3P20309 590 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ADARP55265 1226 aaKnown RBP21.59■■□□□ 1.05
C9orf3-213ENST00000471978 VSX2P58304 361 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-213ENST00000471978 CASC4Q6P4E1 433 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 OR2L3Q8NG85 312 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-213ENST00000471978 WDR54Q9H977 334 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ATP13A2Q9NQ11 1180 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 ENAMQ9NRM1 1142 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 SPATA7Q9P0W8 599 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 KLK4Q9Y5K2 254 aa21.59■■□□□ 1.05
C9orf3-213ENST00000471978 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-213ENST00000471978 FITM1A5D6W6 292 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 AGPSO00116 658 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 SRPX2O60687 465 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-213ENST00000471978 KRT14P02533 472 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 GP1BBP13224 206 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 PAMP19021 973 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 OGNP20774 298 aaKnown RBP21.58■■□□□ 1.05
C9orf3-213ENST00000471978 ATP5DP30049 168 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 MAGEA6P43360 314 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 GBX1Q14549 363 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 NKG7Q16617 165 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 FAM214AQ32MH5 1076 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 WASHC2DQ5SRD0 308 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 FHL5Q5TD97 284 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 ANKRD22Q5VYY1 191 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 NEPROQ6NW34 567 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 COX15Q7KZN9 410 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 OR2A1Q8NGT9 310 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 NACC2Q96BF6 587 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 PSMG3-AS1Q96PY0 264 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 SLC26A1Q9H2B4 701 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 ZNF552Q9H707 407 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-213ENST00000471978 GALPQ9UBC7 116 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 CDC23Q9UJX2 597 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 PPP2R2CQ9Y2T4 447 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 FAM169AQ9Y6X4 670 aa21.58■■□□□ 1.05
C9orf3-213ENST00000471978 SHANK1Q9Y566 2161 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 A0A1W2PPV9 198 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 BLACEA4D250 179 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 MMP11P24347 488 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 VARSP26640 1264 aaKnown RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 OR1D4P47884 311 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 SOX8P57073 446 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 CCZ1BP86790 482 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 CCZ1P86791 482 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 FASTKQ14296 549 aaKnown RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 PLEKHN1Q494U1 663 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 ARMC3Q5W041 872 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 FRMPD2BQ6IN97 320 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 TTC27Q6P3X3 843 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 CENPUQ71F23 418 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 CAND1Q86VP6 1230 aaKnown RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 CILP2Q8IUL8 1156 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 METTL27Q8N6F8 245 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 SPSB2Q99619 263 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 TRIM56Q9BRZ2 755 aaKnown RBP21.57■■□□□ 1.04
C9orf3-213ENST00000471978 IL1RAPL1Q9NZN1 696 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 SAMD15Q9P1V8 674 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 B3GNT3Q9Y2A9 372 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 ANKRD12Q6UB98 2062 aa21.57■■□□□ 1.04
C9orf3-213ENST00000471978 A0A0J9YVX5 310 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 HYKKA2RU49 373 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 E5RI56 91 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 NRP2O60462 931 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 IPO13O94829 963 aaKnown RBP21.56■■□□□ 1.04
C9orf3-213ENST00000471978 AGFG2O95081 481 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 PKMP14618 531 aaKnown RBP21.56■■□□□ 1.04
C9orf3-213ENST00000471978 AIMP2Q13155 320 aaKnown RBP21.56■■□□□ 1.04
C9orf3-213ENST00000471978 ANKRD20A4Q4UJ75 823 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 ACSBG2Q5FVE4 666 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 IGFL3Q6UXB1 125 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 SHISA6Q6ZSJ9 500 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 OR9A1PQ8NGU1 263 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 ACAT2Q9BWD1 397 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 SOX17Q9H6I2 414 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-213ENST00000471978 LRRC4CQ9HCJ2 640 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 CTSFQ9UBX1 484 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 ZC3H7BQ9UGR2 993 aaKnown RBP21.56■■□□□ 1.04
C9orf3-213ENST00000471978 FBXL4Q9UKA2 621 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 VPS9D1Q9Y2B5 631 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 MAU2Q9Y6X3 613 aa21.56■■□□□ 1.04
C9orf3-213ENST00000471978 LOC105369274A0A096LPK9 316 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 LOC102723532A0A0G2JNH3 316 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 MAGEB16A2A368 324 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 ARHGEF33A8MVX0 844 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 TCP11X1B4DZS4 312 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 EIF2S1P05198 315 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 ITGA3P26006 1051 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 CMPK1P30085 196 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 YBX1P67809 324 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 DHX34Q14147 1143 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 KLHL38Q2WGJ6 581 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 RNF44Q7L0R7 432 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms