RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GABRB2P47870 512 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 SPINT3P49223 89 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 HMGN5P82970 282 aaKnown RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 PLGLB1Q02325 96 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 GSE1Q14687 1217 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 SIX1Q15475 284 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 KHDC1Q4VXA5 237 aaKnown RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 ZC3H12BQ5HYM0 836 aaKnown RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 ALS2CLQ60I27 953 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 C11orf87Q6NUJ2 197 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 KIAA0408Q6ZU52 694 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 UNC13DQ70J99 1090 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 TRILQ7L0X0 811 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 NDUFAF2Q8N183 169 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 WDTC1Q8N5D0 677 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 ACVR1CQ8NER5 493 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF397Q8NF99 534 aaPredicted RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 PIH1D2Q8WWB5 315 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 GLYATL1Q969I3 302 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 SARAFQ96BY9 339 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 SPATA32Q96LK8 384 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 WFIKKN1Q96NZ8 548 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 RBM4Q9BWF3 364 aaKnown RBP6.14□□□□□ -1.43
HDAC3-206ENST00000471968 CHRNA10Q9GZZ6 450 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 SYNCQ9H7C4 482 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 ZDHHC11Q9H8X9 412 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 NOD2Q9HC29 1040 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 JKAMPQ9P055 326 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 KIAA1468Q9P260 1216 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 PPIL1Q9Y3C6 166 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 WIF1Q9Y5W5 379 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 PTGDR2Q9Y5Y4 395 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 COLEC10Q9Y6Z7 277 aa6.14□□□□□ -1.43
HDAC3-206ENST00000471968 KIAA1549Q9HCM3 1950 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 IGLV3-12A0A075B6K2 115 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 A0A0J9YYE9 177 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 OVOL3O00110 214 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ACOT7O00154 380 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 NDC80O14777 642 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 MED7O43513 233 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 OR10H2O60403 315 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 POP7O75817 140 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 TRBC1P01850 177 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 UGT2B7P16662 529 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 FBLP22087 321 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 NR2F2P24468 414 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 LOXP28300 417 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 NDUFS1P28331 727 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 TPP2P29144 1249 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PBLDP30039 288 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PSMC2P35998 433 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PRCPP42785 496 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 MAN2A2P49641 1150 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 GZMKP49863 264 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ADARP55265 1226 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 DSC2Q02487 901 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 COL10A1Q03692 680 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ENPEPQ07075 957 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 AP1B1Q10567 949 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 GRM7Q14831 915 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 RAB6CQ53S08 254 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 TMEM205Q6UW68 189 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 CCBE1Q6UXH8 406 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF704Q6ZNC4 412 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PASD1Q8IV76 773 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 UMODL1-AS1Q8N2C9 162 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PPM1KQ8N3J5 372 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ZNF611Q8N823 705 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 TTC29Q8NA56 475 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 HS6ST2Q96MM7 605 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 LLPHQ9BRT6 129 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 WDR83Q9BRX9 315 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 MED18Q9BUE0 208 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 RAB6CQ9H0N0 254 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 THAP2Q9H0W7 228 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 CLSTN2Q9H4D0 955 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 XKR8Q9H6D3 395 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 LDAHQ9H6V9 325 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 MANSC1Q9H8J5 431 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 RTN4Q9NQC3 1192 aaKnown RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 KBTBD4Q9NVX7 518 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 TMEM51Q9NW97 253 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 PKD2L2Q9NZM6 624 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 METRNQ9UJH8 293 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 GDF2Q9UK05 429 aaPredicted RBP6.13□□□□□ -1.43
HDAC3-206ENST00000471968 ACSL5Q9ULC5 683 aa6.13□□□□□ -1.43
HDAC3-206ENST00000471968 LYSTQ99698 3801 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 C1orf232A0A0U1RR37 186 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 PINLYPA6NC86 204 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 HS3ST1O14792 307 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 SNPHO15079 494 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 SLC16A3O15427 465 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 STX10O60499 249 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 KCNJ13O60928 360 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 ERN1O75460 977 aaKnown RBP6.12□□□□□ -1.43
HDAC3-206ENST00000471968 MED26O95402 600 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 IGHG3P01860 377 aa6.12□□□□□ -1.43
HDAC3-206ENST00000471968 PRB2P02812 416 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms