RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NDUFS2O75306 463 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 C8GP07360 202 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 AMD1P17707 334 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 GKP32189 559 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 TRPC1P48995 793 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 EMX1Q04741 257 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 NR1D2Q14995 579 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 LHX8Q68G74 356 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 CRTC1Q6UUV9 634 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 TSPAN33Q86UF1 283 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 FBXL8Q96CD0 374 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ECHDC3Q96DC8 303 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 SH3YL1Q96HL8 342 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 THG1LQ9NWX6 298 aaKnown RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ARL15Q9NXU5 204 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 GPRC5BQ9NZH0 403 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 COQ6Q9Y2Z9 468 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ORC6Q9Y5N6 252 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 FUOMA2VDF0 154 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 CFAP99D6REC4 459 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 MRPS14O60783 128 aaKnown RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 PRAMEF4O60810 478 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 SCN2BO60939 215 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 IGSF6O95976 241 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 B3GALT4O96024 378 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 FUCA1P04066 466 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 GSNP06396 782 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 OCM2P0CE71 109 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 OCMP0CE72 109 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 MPC1LP0DKB6 136 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 IGFBP5P24593 272 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 AOAHP28039 575 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 HNMTP50135 292 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 SLC35A2P78381 396 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ABRQ12979 859 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 SLC14A1Q13336 389 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 PRAMEF9Q5VWM5 478 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 OR2T5Q6IEZ7 315 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 NEK5Q6P3R8 708 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 TPRG1Q6ZUI0 275 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 DNAJB7Q7Z6W7 309 aaPredicted RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 B3GNT8Q7Z7M8 397 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 IGFN1Q86VF2 1251 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 RASGRP3Q8IV61 690 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 OR2T29Q8NH02 315 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 APIPQ96GX9 242 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 TSSK3Q96PN8 268 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 ABCB8Q9NUT2 735 aa13.28□□□□□ -0.28
BRCA1-209ENST00000470026 INTS6Q9UL03 887 aaKnown RBP13.28□□□□□ -0.28
BRCA1-209ENST00000470026 RFXANKO14593 260 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 AXIN1O15169 862 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 PRMT3O60678 531 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 DPM1O60762 260 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 MITFO75030 526 aaPredicted RBP13.27□□□□□ -0.28
BRCA1-209ENST00000470026 ANGPTL1O95841 491 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 PORP16435 677 aaPredicted RBP13.27□□□□□ -0.28
BRCA1-209ENST00000470026 GPX2P18283 190 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.28
BRCA1-209ENST00000470026 DAPP51397 102 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 C21orf58P58505 322 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 ZNF33BQ06732 778 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 MPP7Q5T2T1 576 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 DOK6Q6PKX4 331 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 CEP68Q76N32 757 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 CNIH3Q8TBE1 160 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 YIPF6Q96EC8 236 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 SCRN2Q96FV2 425 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 IGSF21Q96ID5 467 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 COPS8Q99627 209 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 BARD1Q99728 777 aaKnown RBP13.27□□□□□ -0.28
BRCA1-209ENST00000470026 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 ELOVL6Q9H5J4 265 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 AKIP1Q9NQ31 210 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 WARS2Q9UGM6 360 aaKnown RBP13.27□□□□□ -0.28
BRCA1-209ENST00000470026 PCDHGA10Q9Y5H3 936 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 U3KQV3 271 aa13.27□□□□□ -0.28
BRCA1-209ENST00000470026 GFYI3L273 518 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 SCAMP3O14828 347 aaKnown RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 SLC16A5O15375 505 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 XPNPEP2O43895 674 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 XYLBO75191 536 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 FPR1P21462 350 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 SERPINA4P29622 427 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 IDUAP35475 653 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 OPRL1P41146 370 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 ALDH7A1P49419 539 aaKnown RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 BCAP31P51572 246 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 WNT3P56703 355 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 RELAQ04206 551 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 SP140Q13342 867 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 VEPH1Q14D04 833 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 TAF12Q16514 161 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms