RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 JMJD6Q6NYC1 403 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 TTLL10Q6ZVT0 673 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 COX15Q7KZN9 410 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 AGGF1Q8N302 714 aaeCLIP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 RAB42Q8N4Z0 105 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 RBMXL3Q8N7X1 1067 aaKnown RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 CPT1CQ8TCG5 803 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MAGEC3Q8TD91 643 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MAGOHBQ96A72 148 aaKnown RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 PTERQ96BW5 349 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 FAM136AQ96C01 138 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MS4A14Q96JA4 679 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 PBKQ96KB5 322 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 SERPINB12Q96P63 405 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 SPSB2Q99619 263 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 SLC26A1Q9H2B4 701 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 CUTCQ9NTM9 273 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 INTS10Q9NVR2 710 aaKnown RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 P4HTMQ9NXG6 502 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 IL1RAPL1Q9NZN1 696 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 GALPQ9UBC7 116 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 G3BP2Q9UN86 482 aaKnown RBP15.62■□□□□ 0.09
COL9A3-208ENST00000469802 VPS9D1Q9Y2B5 631 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MED16Q9Y2X0 877 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 MAP4K5Q9Y4K4 846 aa15.62■□□□□ 0.09
COL9A3-208ENST00000469802 NAV2Q8IVL1 2488 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 OR2A25A4D2G3 310 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 A6NL46 340 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 TTLL8A6PVC2 850 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 MYO1CO00159 1063 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 NRDCO43847 1150 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 IGHEP01854 428 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ALBP02768 609 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 PKMP14618 531 aaKnown RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 COILP38432 576 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 CLCN7P51798 805 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 SOX8P57073 446 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 DHX34Q14147 1143 aaKnown RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 FASTKQ14296 549 aaKnown RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ANKRD20A4Q4UJ75 823 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ACSBG2Q5FVE4 666 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 SLC6A19Q695T7 634 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ZNF470Q6ECI4 717 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 FRMPD2BQ6IN97 320 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 CCDC137Q6PK04 289 aaKnown RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 FAM26EQ8N5C1 309 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 GALNT11Q8NCW6 608 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 GIMAP7Q8NHV1 300 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 PNPLA2Q96AD5 504 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 NACC2Q96BF6 587 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ZNF669Q96BR6 464 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 FER1L6-AS2Q96M78 137 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 MIPEPQ99797 713 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 SELENOSQ9BQE4 189 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 SAMD15Q9P1V8 674 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 C5AR2Q9P296 337 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 ANKMY1Q9P2S6 941 aa15.61■□□□□ 0.09
COL9A3-208ENST00000469802 SPTAN1Q13813 2472 aaKnown RBP15.61■□□□□ 0.09
COL9A3-208ENST00000469802 MAGEB16A2A368 324 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 SDR42E2A6NKP2 422 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 PGRMC1O00264 195 aaKnown RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 PEX12O00623 359 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 SRPX2O60687 465 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 USP1O94782 785 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 MED26O95402 600 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 ALAS2P22557 587 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 MMP11P24347 488 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 UQCRFS1P47985 274 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 YBX1P67809 324 aaKnown RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 ESPL1Q14674 2120 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 MYBPC3Q14896 1274 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 NAA25Q14CX7 972 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 NKG7Q16617 165 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 KLHL38Q2WGJ6 581 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 CASC4Q6P4E1 433 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 IGFL3Q6UXB1 125 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 NEK10Q6ZWH5 1172 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 OVCH1Q7RTY7 1134 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 DENND6AQ8IWF6 608 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 GALNT16Q8N428 558 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 NAT8LQ8N9F0 302 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 TTC29Q8NA56 475 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 CLEC1AQ8NC01 280 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 OR9A1PQ8NGU1 263 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 SLC30A3Q99726 388 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 SLC6A20Q9NP91 592 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 KLHL42Q9P2K6 505 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 CTSFQ9UBX1 484 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 TSR3Q9UJK0 312 aaKnown RBP15.6■□□□□ 0.09
COL9A3-208ENST00000469802 FAM169AQ9Y6X4 670 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 HIVEP3Q5T1R4 2406 aa15.6■□□□□ 0.09
COL9A3-208ENST00000469802 LOC105369274A0A096LPK9 316 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 LOC102723532A0A0G2JNH3 316 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 GOLGA8MH3BSY2 632 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 AGPSO00116 658 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 PHF2O75151 1096 aa15.59■□□□□ 0.09
COL9A3-208ENST00000469802 F7P08709 466 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 PIM1P11309 404 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-208ENST00000469802 CHRM3P20309 590 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms