RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 LIPMQ5VYY2 423 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 KIAA1614Q5VZ46 1190 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 ABRAXAS1Q6UWZ7 409 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CCDC81Q6ZN84 652 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CILP2Q8IUL8 1156 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CENPLQ8N0S6 344 aaPredicted RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 TMEM151AQ8N4L1 468 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CXorf40BQ96DE9 158 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 ELMO2Q96JJ3 720 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 GPR78Q96P69 363 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 TAAR9Q96RI9 348 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 SLC39A1Q9NY26 324 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 B3GALT1Q9Y5Z6 326 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CFAP46Q8IYW2 2715 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CAPN14A8MX76 684 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 PHGDHO43175 533 aaKnown RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 OGNP20774 298 aaKnown RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 SERPINB5P36952 375 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 TAS2R39P59534 338 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 PRAMEP78395 509 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 GPR18Q14330 331 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 TMEM164Q5U3C3 297 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 AGAP9Q5VTM2 703 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 PCSK4Q6UW60 755 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 WASH2PQ6VEQ5 465 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 AVL9Q8NBF6 648 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 DNAJC1Q96KC8 554 aaKnown RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CTRCQ99895 268 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 MRPL57Q9BQC6 102 aaKnown RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 DRC3Q9H069 523 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 WASH6PQ9NQA3 447 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 FBXO6Q9NRD1 293 aaPredicted RBP17.12■□□□□ 0.33
MRPL28-208ENST00000469744 ARL8BQ9NVJ2 186 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 CRLS1Q9UJA2 301 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 TRIM33Q9UPN9 1127 aa17.12■□□□□ 0.33
MRPL28-208ENST00000469744 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 K7ENP7 123 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 LYPLA1O75608 230 aaPredicted RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 UBXN7O94888 489 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 CBX6O95503 412 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 ATP6V1G2O95670 118 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 DNAJB13P59910 316 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 ANKS6Q68DC2 871 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 INO80CQ6PI98 192 aaPredicted RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 CNSTQ6PJW8 725 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 ARHGAP22Q7Z5H3 698 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 CEP97Q8IW35 865 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 BMPERQ8N8U9 685 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 KCTD4Q8WVF5 259 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 HDAC10Q969S8 669 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 SCYL1Q96KG9 808 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 TGM7Q96PF1 710 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 BTBD10Q9BSF8 475 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 GATA5Q9BWX5 397 aaPredicted RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 MRPL46Q9H2W6 279 aaKnown RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 POT1Q9NUX5 634 aa17.11■□□□□ 0.33
MRPL28-208ENST00000469744 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 CFAP20Q9Y6A4 193 aaKnown RBP17.11■□□□□ 0.33
MRPL28-208ENST00000469744 MN1Q10571 1320 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 ZNF195O14628 629 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 ATXN7O15265 892 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 WISP3O95389 354 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 HSPA4LO95757 839 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 S1PR4O95977 384 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 SBK3P0C264 359 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 PRSS56P0CW18 603 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 KITP10721 976 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 ESRRAP11474 423 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 AMD1P17707 334 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 HALP42357 657 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 DMPKQ09013 629 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 TUBB3Q13509 450 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 COL9A2Q14055 689 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 FAM83EQ2M2I3 478 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 FAM45BPQ6NSW5 357 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 MRNIPQ6NTE8 343 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 GPATCH11Q8N954 259 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 FAM45AQ8TCE6 357 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 SLC39A7Q92504 469 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 CCDC126Q96EE4 140 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 RNF31Q96EP0 1072 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 CCDC106Q9BWC9 280 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 EPB41L1Q9H4G0 881 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 UCK1Q9HA47 277 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 POPDC3Q9HBV1 291 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 MARCOQ9UEW3 520 aaPredicted RBP17.1■□□□□ 0.33
MRPL28-208ENST00000469744 RAP2CQ9Y3L5 183 aa17.1■□□□□ 0.33
MRPL28-208ENST00000469744 SGTAO43765 313 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 NPHS1O60500 1241 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 F7P08709 466 aaPredicted RBP17.09■□□□□ 0.33
MRPL28-208ENST00000469744 RBP1P09455 135 aa17.09■□□□□ 0.33
MRPL28-208ENST00000469744 ITGALP20701 1170 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms