RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 SLC5A12Q1EHB4 618 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TAF1BQ53T94 588 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ACSBG2Q5FVE4 666 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ARSJQ5FYB0 599 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HP1BP3Q5SSJ5 553 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 RBM20Q5T481 1227 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HES3Q5TGS1 186 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PAQR3Q6TCH7 311 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SPESP1Q6UW49 350 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 DHRS13Q6UX07 377 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 CYHR1Q6ZMK1 362 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 VRK3Q8IV63 474 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SFTPA2Q8IWL1 248 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HOMEZQ8IX15 550 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 CTAGE3PQ8IX95 158 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 KLHDC8AQ8IYD2 350 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ADGRF3Q8IZF5 1079 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 KRT222Q8N1A0 295 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 RIBC1Q8N443 379 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 LILRA3Q8N6C8 439 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PPM1NQ8N819 430 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 GPATCH11Q8N954 259 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SIDT2Q8NBJ9 832 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PLPP7Q8NBV4 271 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 LRRN4CLQ8ND94 238 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 AGBL5Q8NDL9 886 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 OR52E1Q8NGJ3 308 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 OR2L8Q8NGY9 312 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 WDR36Q8NI36 951 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 LKAAEAR1Q8TD35 194 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 MCOLN3Q8TDD5 553 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ACMSDQ8TDX5 336 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 DCAKDQ8WVC6 231 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HNRNPLLQ8WVV9 542 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PATE1Q8WXA2 126 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ATL1Q8WXF7 558 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 KLHL6Q8WZ60 621 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SMPDL3AQ92484 453 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 KIAA1191Q96A73 305 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ZUFSPQ96AP4 578 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 NXPE2Q96DL1 559 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 AHCYL2Q96HN2 611 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SEC16BQ96JE7 1060 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 CABS1Q96KC9 395 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HIST1H2AHQ96KK5 128 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 CCDC138Q96M89 665 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TEFMQ96QE5 360 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PAFAH2Q99487 392 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 NDNQ99608 321 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 OLFM1Q99784 485 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 HIST1H2AJQ99878 128 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 H2AFJQ9BTM1 129 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TMEM109Q9BVC6 243 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 DDA1Q9BW61 102 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TRIM54Q9BYV2 358 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ASPSCR1Q9BZE9 553 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ROPN1BQ9BZX4 212 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PCBD2Q9H0N5 130 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 EPB41L4BQ9H329 900 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SRMSQ9H3Y6 488 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 POLR1BQ9H9Y6 1135 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ROPN1Q9HAT0 212 aaPredicted RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PARVBQ9HBI1 364 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 SMYD2Q9NRG4 433 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TPSG1Q9NRR2 321 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 C1GALT1Q9NS00 363 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 UTP6Q9NYH9 597 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 OGFRQ9NZT2 677 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ANKMY1Q9P2S6 941 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 LNPEPQ9UIQ6 1025 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ANGPTL2Q9UKU9 493 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 POMT2Q9UKY4 750 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PSMD13Q9UNM6 376 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 BTRCQ9Y297 605 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 ZFYVE26Q68DK2 2539 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 TLN1Q9Y490 2541 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 NUP210LQ5VU65 1888 aa3.41□□□□□ -1.86
TRIM59-202ENST00000468542 PRRC2CQ9Y520 2896 aaKnown RBP3.41□□□□□ -1.86
TRIM59-202ENST00000468542 FAM208BQ5VWN6 2430 aa3.4□□□□□ -1.86
TRIM59-202ENST00000468542 A0A0J9YY10 115 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 IQANK1A0A1B0GTG1 560 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 PIPSLA2A3N6 862 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 OR6C74A6NCV1 312 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 PABPN1LA6NDY0 278 aaKnown RBP3.4□□□□□ -1.87
TRIM59-202ENST00000468542 SYCE1LA8MT33 242 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 ARHGEF33A8MVX0 844 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 CDRT15L2A8MXV6 281 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 C9orf172C9J069 976 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 E7ENX8 843 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 BTN3A3O00478 584 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 BTN3A1O00481 513 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 NVLO15381 856 aaKnown RBP3.4□□□□□ -1.87
TRIM59-202ENST00000468542 DYRK3O43781 588 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 HYAL3O43820 417 aaPredicted RBP3.4□□□□□ -1.87
TRIM59-202ENST00000468542 PRICKLE3O43900 615 aaPredicted RBP3.4□□□□□ -1.87
TRIM59-202ENST00000468542 KLK8O60259 260 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 KERAO60938 352 aa3.4□□□□□ -1.87
TRIM59-202ENST00000468542 CSO75390 466 aaKnown RBP3.4□□□□□ -1.87
TRIM59-202ENST00000468542 ERLIN1O75477 346 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms