RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 LPAR3Q9UBY5 353 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
UBR4-210ENST00000466969 NPFFR2Q9Y5X5 522 aa11.89□□□□□ -0.51
UBR4-210ENST00000466969 ANKRD62A6NC57 917 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 QSOX1O00391 747 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 IFRD1O00458 451 aaPredicted RBP11.88□□□□□ -0.51
UBR4-210ENST00000466969 CASKO14936 926 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 PRPSAP2O60256 369 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
UBR4-210ENST00000466969 SOX30O94993 753 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 PGRP06401 933 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 AMPD1P23109 780 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 STX17P56962 302 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 SORDQ00796 357 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 PRKG2Q13237 762 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 VEZF1Q14119 521 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 CAPRIN1Q14444 709 aaKnown RBP11.88□□□□□ -0.51
UBR4-210ENST00000466969 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 ZC3H12BQ5HYM0 836 aaKnown RBP11.88□□□□□ -0.51
UBR4-210ENST00000466969 C1orf185Q5T7R7 199 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 RTL6Q6ICC9 239 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 TMC3Q7Z5M5 1100 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 TRIM59Q8IWR1 403 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 CFAP206Q8IYR0 622 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 ZBED6CLQ96FA7 236 aaPredicted RBP11.88□□□□□ -0.51
UBR4-210ENST00000466969 HGH1Q9BTY7 390 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 TRIM7Q9C029 511 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 MVB12BQ9H7P6 319 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
UBR4-210ENST00000466969 DSCAMO60469 2012 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 OR14I1A6ND48 311 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 ISM1B1AKI9 464 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 CDK2AP1O14519 115 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 MAN1A2O60476 641 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 WDR1O75083 606 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 CHRM5P08912 532 aaPredicted RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 C8orf89P0DMQ9 161 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 MMP8P22894 467 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 SHMT2P34897 504 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 SYKP43405 635 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 CYB561P49447 251 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 ZNF143P52747 638 aaPredicted RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 EFNA3P52797 238 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 IHHQ14623 411 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 PDCD2Q16342 344 aaPredicted RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 CA9Q16790 459 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 COBLL1Q53SF7 1204 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 PPP6R3Q5H9R7 873 aaPredicted RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 TMEM205Q6UW68 189 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 DET1Q7L5Y6 550 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 MEX3DQ86XN8 651 aaKnown RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 SULF2Q8IWU5 870 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 LIX1Q8N485 282 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 TEX26Q8N6G2 289 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 PHC3Q8NDX5 983 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 METTL21AQ8WXB1 218 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 DACH2Q96NX9 599 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 SMC6Q96SB8 1091 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 NPAS2Q99743 824 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
UBR4-210ENST00000466969 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 ALKBH4Q9NXW9 302 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 TRPC4Q9UBN4 977 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 DNAJC12Q9UKB3 198 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 TRRAPQ9Y4A5 3859 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 RYR3Q15413 4870 aa11.87□□□□□ -0.51
UBR4-210ENST00000466969 TPH1P17752 444 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 MAGP20916 626 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 AKT1P31749 480 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 VSX2P58304 361 aaPredicted RBP11.86□□□□□ -0.51
UBR4-210ENST00000466969 TAS2R50P59544 299 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
UBR4-210ENST00000466969 UNC5AQ6ZN44 842 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 GBP6Q6ZN66 633 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 SPHK1Q9NYA1 384 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 ICKQ9UPZ9 632 aa11.86□□□□□ -0.51
UBR4-210ENST00000466969 PRKDCP78527 4128 aaKnown RBP11.86□□□□□ -0.51
UBR4-210ENST00000466969 IGHV3-20A0A0C4DH32 117 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 FITM1A5D6W6 292 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 PSMA7O14818 248 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.51
UBR4-210ENST00000466969 PEX1O43933 1283 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 GNA14O95837 355 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 MMEP08473 750 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 PIRTP0C851 137 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 MSH3P20585 1137 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 PPP2R5EQ16537 467 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 CLEC12BQ2HXU8 276 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 ERMARDQ5T6L9 678 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 ZNF468Q5VIY5 522 aaPredicted RBP11.85□□□□□ -0.51
UBR4-210ENST00000466969 ALG1LQ6GMV1 187 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 FIGLAQ6QHK4 219 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms