RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LRRC56Q8IYG6 542 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 CENPLQ8N0S6 344 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 RIBC1Q8N443 379 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 C2orf73Q8N5S3 287 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 OR8K5Q8NH50 307 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 ACMSDQ8TDX5 336 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 TMEM121BQ9BXQ6 578 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 ROPN1BQ9BZX4 212 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 ROPN1Q9HAT0 212 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 RRAGDQ9NQL2 400 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 CCDC177Q9NQR7 707 aaPredicted RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 OCIAD1Q9NX40 245 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 SOHLH2Q9NX45 425 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 SLC39A1Q9NY26 324 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 UTP6Q9NYH9 597 aaKnown RBP16.34■□□□□ 0.21
USP39-211ENST00000465282 PISDQ9UG56 409 aa16.34■□□□□ 0.21
USP39-211ENST00000465282 CCDC151A5D8V7 595 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 KRT87PA6NCN2 255 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 TMEM8BA6NDV4 472 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 SYCE1LA8MT33 242 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 CDRT15L2A8MXV6 281 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 POLR1CO15160 346 aaPredicted RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 SHBGP04278 402 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 CCL4P13236 92 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 HRH2P25021 359 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 CMPK1P30085 196 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 PRDX1Q06830 199 aaKnown RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 NAA30Q147X3 362 aaPredicted RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 TSNAXIP1Q2TAA8 658 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 CAPN13Q6MZZ7 669 aaPredicted RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 CEACAM20Q6UY09 585 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 TAX1BP1Q86VP1 789 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 C19orf47Q8N9M1 422 aaKnown RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 OR2L3Q8NG85 312 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 OR56A3Q8NH54 315 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 TSNARE1Q96NA8 513 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 SGPP1Q9BX95 441 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 VPS11Q9H270 941 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 CCDC86Q9H6F5 360 aaKnown RBP16.33■□□□□ 0.2
USP39-211ENST00000465282 FANCEQ9HB96 536 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 ASCL3Q9NQ33 180 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 IGSF5Q9NSI5 407 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 ANKMY1Q9P2S6 941 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 IKZF3Q9UKT9 509 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 RNF112Q9ULX5 631 aa16.33■□□□□ 0.2
USP39-211ENST00000465282 FREM2Q5SZK8 3169 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 BRINP1O60477 761 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 KERAO60938 352 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 RFPL1O75677 317 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 GUCA1CO95843 209 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 HGFP14210 728 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 TFEBP19484 476 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 ITIH1P19827 911 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 CD82P27701 267 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 MAPK10P53779 464 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 RELAQ04206 551 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 DLG1Q12959 904 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 ICE2Q659A1 982 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 SULT1C3Q6IMI6 304 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 FOXR1Q6PIV2 292 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 SUSD1Q6UWL2 747 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 SPATA6LQ8N4H0 392 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 PTERQ96BW5 349 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 NXNL1Q96CM4 212 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 PPM1MQ96MI6 270 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 OR6C1Q96RD1 312 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 MIPEPQ99797 713 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 EGFL8Q99944 293 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 HAUS8Q9BT25 410 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 TMEM109Q9BVC6 243 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 CNOT10Q9H9A5 744 aaKnown RBP16.32■□□□□ 0.2
USP39-211ENST00000465282 ACSL6Q9UKU0 697 aa16.32■□□□□ 0.2
USP39-211ENST00000465282 FRYQ5TBA9 3013 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 IPO13O94829 963 aaKnown RBP16.31■□□□□ 0.2
USP39-211ENST00000465282 S100BP04271 92 aaPredicted RBP16.31■□□□□ 0.2
USP39-211ENST00000465282 RBP1P09455 135 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 FGF5P12034 268 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 GGT5P36269 586 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 ETV5P41161 510 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 GRIA3P42263 894 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 TBPL1P62380 186 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 FOXM1Q08050 763 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 CYP4F3Q08477 520 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 NAE1Q13564 534 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 OR4D1Q15615 310 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 TBC1D25Q3MII6 688 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 ZC3H12BQ5HYM0 836 aaKnown RBP16.31■□□□□ 0.2
USP39-211ENST00000465282 THEMIS2Q5TEJ8 643 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 KIAA1614Q5VZ46 1190 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 FIGLAQ6QHK4 219 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 LCTLQ6UWM7 567 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 UNQ6494/PRO21346Q6UXR6 183 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 MBOAT1Q6ZNC8 495 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 TRIM73Q86UV7 250 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 KLHDC8AQ8IYD2 350 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 PDPRQ8NCN5 879 aa16.31■□□□□ 0.2
USP39-211ENST00000465282 PPFIBP2Q8ND30 876 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms