RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 OCC1Q8TAD7 63 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 PHLDA1Q8WV24 401 aaPredicted RBP3.77□□□□□ -1.81
CLK1-208ENST00000464454 NSMAFQ92636 917 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 CCDC114Q96M63 670 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 FNBP1Q96RU3 617 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 INPP5KQ9BT40 448 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 BICC1Q9H694 974 aaKnown RBP3.77□□□□□ -1.81
CLK1-208ENST00000464454 TRPV4Q9HBA0 871 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.77□□□□□ -1.81
CLK1-208ENST00000464454 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
CLK1-208ENST00000464454 WDR83OSQ9Y284 106 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 TMED3Q9Y3Q3 217 aa3.77□□□□□ -1.81
CLK1-208ENST00000464454 LOC101059948A0A1B0GTJ6 334 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 A0A1W2PPK0 400 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 DUXAA6NLW8 204 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 ENO4A6NNW6 628 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 ERVV-2B6SEH9 535 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 IFIT3O14879 490 aaKnown RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 EDIL3O43854 480 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 RPS6KA5O75582 802 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 IGHV4-38-2P0DP08 117 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 TCF4P15884 667 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 EFNA1P20827 205 aaPredicted RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 CA4P22748 312 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 TCF7P36402 384 aaPredicted RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 TUBB4BP68371 445 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 KLC1Q07866 573 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 PTK6Q13882 451 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 LRRC73Q5JTD7 316 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 SPDYCQ5MJ68 293 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 MFSD6Q6ZSS7 791 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 LGI2Q8N0V4 545 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 NDUFAF2Q8N183 169 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 MAPKAPK5-AS1Q8N8E1 139 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 OR11H4Q8NGC9 324 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 OR4K1Q8NGD4 311 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 PROX1Q92786 737 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 ZNF524Q96C55 264 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 FAM20AQ96MK3 541 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 SPATA33Q96N06 139 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 F2RL3Q96RI0 385 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 INTS14Q96SY0 518 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 URM1Q9BTM9 101 aaKnown RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 LAT2Q9GZY6 243 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 ALDH8A1Q9H2A2 487 aaPredicted RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 SDR39U1Q9NRG7 319 aaPredicted RBP3.76□□□□□ -1.81
CLK1-208ENST00000464454 GSN-AS1Q9NRJ2 163 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 FGF21Q9NSA1 209 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 ADPRHL2Q9NX46 363 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 GAB2Q9UQC2 676 aa3.76□□□□□ -1.81
CLK1-208ENST00000464454 IGLV9-49A0A0B4J1Y8 123 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 TRAV24A0A0B4J272 114 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 A0A1W2PPW3 197 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 DNM1LO00429 736 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 STX6O43752 255 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 CIDEAO60543 219 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 ATP6AP2O75787 350 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 TSHBP01222 138 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 MUTP22033 750 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 CA6P23280 308 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 WNT5AP41221 380 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 RGS7P49802 495 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 MAZP56270 477 aaKnown RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 HERV-K104P61576 105 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 TNK1Q13470 666 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 PHKG1Q16816 387 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 CDO1Q16878 200 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 ZC2HC1CQ53FD0 456 aaPredicted RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 ADAM5Q6NVV9 412 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 ZNF449Q6P9G9 518 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 RBMS3Q6XE24 437 aaKnown RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 NRARPQ7Z6K4 114 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 PHLDB2Q86SQ0 1253 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 TRPT1Q86TN4 253 aaKnown RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 C4orf19Q8IY42 314 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 FAM9BQ8IZU0 186 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 EID3Q8N140 333 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 RASGEF1AQ8N9B8 481 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 OLIG1Q8TAK6 271 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 FAM76AQ8TAV0 307 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 GDAP1Q8TB36 358 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 HEXDCQ8WVB3 486 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 RAD54LQ92698 747 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 CORO2AQ92828 525 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 MR1Q95460 341 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 TMEM143Q96AN5 459 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 FAM71F1Q96KD3 344 aaPredicted RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 SLC2A11Q9BYW1 496 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 SNX25Q9H3E2 840 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 Q9H8V8 135 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 COPS7BQ9H9Q2 264 aaPredicted RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 DDX43Q9NXZ2 648 aaKnown RBP3.75□□□□□ -1.81
CLK1-208ENST00000464454 ERAP1Q9NZ08 941 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 MDFICQ9P1T7 246 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 DNAJB9Q9UBS3 223 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 WDR81Q562E7 1941 aa3.75□□□□□ -1.81
CLK1-208ENST00000464454 C5orf52A6NGY3 159 aa3.74□□□□□ -1.81
CLK1-208ENST00000464454 CASTOR2A6NHX0 329 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms