RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TNRC6AQ8NDV7 1962 aaKnown RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 FAM237BA0A1B0GVD1 139 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 A0A1W2PPV9 198 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 DSCR3O14972 297 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 SRPX2O60687 465 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 ATP5DP30049 168 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 COILP38432 576 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 VSX2P58304 361 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 DHX34Q14147 1143 aaKnown RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 ACSBG2Q5FVE4 666 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 VWA5B1Q5TIE3 1220 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 ARMC3Q5W041 872 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 CILP2Q8IUL8 1156 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 TTC29Q8NA56 475 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 GALNT11Q8NCW6 608 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 MCUQ8NE86 351 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 OR2L3Q8NG85 312 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 OR2A1Q8NGT9 310 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 OR9A1PQ8NGU1 263 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.06■□□□□ 0.48
SF3A1-205ENST00000463818 ENAMQ9NRM1 1142 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 SPATA7Q9P0W8 599 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 LUZP4Q9P127 313 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 C5AR2Q9P296 337 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 JRKLQ9Y4A0 524 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 KLK4Q9Y5K2 254 aa18.06■□□□□ 0.48
SF3A1-205ENST00000463818 A0A0J9YVX5 310 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 FITM1A5D6W6 292 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 E5RI56 91 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 GOLGA8MH3BSY2 632 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 ALBP02768 609 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 MLNP12872 115 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 GNLYP22749 145 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 OR1D4P47884 311 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 UQCRFS1P47985 274 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 YBX1P67809 324 aaKnown RBP18.05■□□□□ 0.48
SF3A1-205ENST00000463818 THOC5Q13769 683 aaKnown RBP18.05■□□□□ 0.48
SF3A1-205ENST00000463818 MYBPC3Q14896 1274 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 KLHL38Q2WGJ6 581 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 FAM214AQ32MH5 1076 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 SLC6A19Q695T7 634 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 FRMPD2BQ6IN97 320 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 Q8NA96 180 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 PNPLA2Q96AD5 504 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 FKBP10Q96AY3 582 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 ZNF669Q96BR6 464 aaPredicted RBP18.05■□□□□ 0.48
SF3A1-205ENST00000463818 ACAT2Q9BWD1 397 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 ATP13A2Q9NQ11 1180 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 ZC3H7BQ9UGR2 993 aaKnown RBP18.05■□□□□ 0.48
SF3A1-205ENST00000463818 VPS9D1Q9Y2B5 631 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 PCSK5Q92824 1860 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 DOPEY2Q9Y3R5 2298 aa18.05■□□□□ 0.48
SF3A1-205ENST00000463818 RELNP78509 3460 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 LOC105369274A0A096LPK9 316 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 LOC102723532A0A0G2JNH3 316 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 CTAGE9A4FU28 777 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 ARHGEF33A8MVX0 844 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 AGPSO00116 658 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 PSIP1O75475 530 aaKnown RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 SOX8P57073 446 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 NKG7Q16617 165 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 PLEKHN1Q494U1 663 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 FBXO42Q6P3S6 717 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 CCDC137Q6PK04 289 aaKnown RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 COX15Q7KZN9 410 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 OR4N4Q8N0Y3 316 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 METTL27Q8N6F8 245 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 COL26A1Q96A83 441 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 NACC2Q96BF6 587 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 SERPINB12Q96P63 405 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 SLC26A1Q9H2B4 701 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 ZNF552Q9H707 407 aaPredicted RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 WDR54Q9H977 334 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 XAB2Q9HCS7 855 aaKnown RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 INTS10Q9NVR2 710 aaKnown RBP18.04■□□□□ 0.48
SF3A1-205ENST00000463818 NEU2Q9Y3R4 380 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 PTPN13Q12923 2485 aa18.04■□□□□ 0.48
SF3A1-205ENST00000463818 ZCWPW2A0A1B0GU75 182 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 HYKKA2RU49 373 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 NRP2O60462 931 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 KLHL41O60662 606 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 USP1O94782 785 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 EIF2S1P05198 315 aaKnown RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 F7P08709 466 aaPredicted RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 MMP11P24347 488 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 CMPK1P30085 196 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 CLCN7P51798 805 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 CTBP1Q13363 440 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 CYP1B1Q16678 543 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 PRR30Q53SZ7 412 aaPredicted RBP18.03■□□□□ 0.48
SF3A1-205ENST00000463818 ZNF470Q6ECI4 717 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 SUSD1Q6UWL2 747 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 SPNS2Q8IVW8 549 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 DENND6AQ8IWF6 608 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 REXO1L1PQ8IX06 675 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 DTWD1Q8N5C7 304 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 SMPDL3AQ92484 453 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 PKP4Q99569 1192 aa18.03■□□□□ 0.48
SF3A1-205ENST00000463818 SPSB2Q99619 263 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms