RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	OASL	Q15646	514 aa	Known RBP	10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	P3H1	Q32P28	736 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	TCTE1	Q5JU00	501 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	TSTD2	Q5T7W7	516 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	AFTPH	Q6ULP2	937 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	ISLR2	Q6UXK2	745 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	RNF44	Q7L0R7	432 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	STT3B	Q8TCJ2	826 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	SLC22A18	Q96BI1	424 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	THOC3	Q96J01	351 aa	Known RBP	10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	CALR3	Q96L12	384 aa	Known RBP	10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	LMF1	Q96S06	567 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	SELENOS	Q9BQE4	189 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	CARD6	Q9BX69	1037 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	P2RY12	Q9H244	342 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	IRAK4	Q9NWZ3	460 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	NFS1	Q9Y697	457 aa		10.66	□□□□□ -0.7
PTPN7-204	ENST00000462815	POLQ	O75417	2590 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	LOC105369274	A0A096LPK9	316 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	LOC102723532	A0A0G2JNH3	316 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	HNRNPR	O43390	633 aa	Known RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	KDM1A	O60341	852 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	FKBP9	O95302	570 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ZGLP1	P0C6A0	271 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	PIM1	P11309	404 aa	Predicted RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ZNF75D	P51815	510 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	SNRPN	P63162	240 aa	Known RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	CDH17	Q12864	832 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	GBX1	Q14549	363 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	RBBP7	Q16576	425 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	PRTG	Q2VWP7	1150 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	RAD9B	Q6WBX8	426 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	LINC00696	Q6ZRV3	163 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	NLRP9	Q7RTR0	991 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	LAPTM4B	Q86VI4	370 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	OR4N4	Q8N0Y3	316 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	KRT222	Q8N1A0	295 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	TAB3	Q8N5C8	712 aa	Predicted RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	OR2L3	Q8NG85	312 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	OR2A1	Q8NGT9	310 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	OR4L1	Q8NH43	312 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ASZ1	Q8WWH4	475 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ZUFSP	Q96AP4	578 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	C8orf44	Q96CB5	159 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	CNDP1	Q96KN2	507 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	EPS8L2	Q9H6S3	715 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	ZNF160	Q9HCG1	818 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	IL1RAPL1	Q9NZN1	696 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	MRPS2	Q9Y399	296 aa	Known RBP	10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	TCAF1	Q9Y4C2	921 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	MAU2	Q9Y6X3	613 aa		10.65	□□□□□ -0.7
PTPN7-204	ENST00000462815	MYO7B	Q6PIF6	2116 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	IGKV1-8	A0A0C4DH67	115 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815		A0A0U1RQJ8	604 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ARHGAP10	A1A4S6	786 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	HEATR9	A2RTY3	570 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	HYKK	A2RU49	373 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	OR2A25	A4D2G3	310 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ERI2	A8K979	691 aa	Known RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	PSMD3	O43242	534 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	SRPX2	O60687	465 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	JRK	O75564	520 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	C1orf105	O95561	183 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	CELA2A	P08217	269 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	PRR35	P0CG20	571 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ERG	P11308	486 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ELAVL4	P26378	380 aa	Known RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	BDKRB1	P46663	353 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	TNFSF10	P50591	281 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	PER3	P56645	1201 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	KCNK10	P57789	538 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	VSX2	P58304	361 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	SPA17	Q15506	151 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	SF1	Q15637	639 aa	Known RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	WASHC2D	Q5SRD0	308 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	SP5	Q6BEB4	398 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	FBXO42	Q6P3S6	717 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	LINC00523	Q86TU6	105 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	LDB1	Q86U70	411 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	FJX1	Q86VR8	437 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	BCORP1	Q8N888	145 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	TTC29	Q8NA56	475 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ATG4A	Q8WYN0	398 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	NR4A3	Q92570	626 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	PEX13	Q92968	403 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	LRRC45	Q96CN5	670 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	MRFAP1L1	Q96HT8	127 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	CRB3	Q9BUF7	120 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	TRIM5	Q9C035	493 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ETNK1	Q9HBU6	452 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	ZNF304	Q9HCX3	659 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	OLAH	Q9NV23	265 aa		10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	INTS7	Q9NVH2	962 aa	Known RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	STOX2	Q9P2F5	926 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	RUVBL2	Q9Y230	463 aa	Known RBP	10.64	□□□□□ -0.71
PTPN7-204	ENST00000462815	EPN1	Q9Y6I3	576 aa	Predicted RBP	10.64	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms