RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MIPEPQ99797 713 aa15.25■□□□□ 0.03
ERCC3-206ENST00000462306 PARVBQ9HBI1 364 aa15.25■□□□□ 0.03
ERCC3-206ENST00000462306 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.25■□□□□ 0.03
ERCC3-206ENST00000462306 MTRF1LQ9UGC7 380 aaKnown RBP15.25■□□□□ 0.03
ERCC3-206ENST00000462306 SERTAD3Q9UJW9 196 aa15.25■□□□□ 0.03
ERCC3-206ENST00000462306 IKZF3Q9UKT9 509 aa15.25■□□□□ 0.03
ERCC3-206ENST00000462306 PCDHB3Q9Y5E6 796 aa15.25■□□□□ 0.03
ERCC3-206ENST00000462306 ZNF839A8K0R7 811 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 TERTO14746 1132 aaKnown RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 CPNE3O75131 537 aaKnown RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 WISP3O95389 354 aaPredicted RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 CTSBP07858 339 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 GP5P40197 560 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 ITGA1P56199 1179 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 POU4F1Q01851 419 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 ZNF460Q14592 562 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 GPR155Q7Z3F1 870 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 CTAGE3PQ8IX95 158 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 PPM1NQ8N819 430 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 ZUFSPQ96AP4 578 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 CCDC138Q96M89 665 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 FMO2Q99518 471 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 GPR22Q99680 433 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 ACAT2Q9BWD1 397 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 AKIRIN1Q9H9L7 192 aaPredicted RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 L2HGDHQ9H9P8 463 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 INTS7Q9NVH2 962 aaKnown RBP15.24■□□□□ 0.03
ERCC3-206ENST00000462306 NINJ2Q9NZG7 142 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 TXNDC16Q9P2K2 825 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 PLCL2Q9UPR0 1127 aa15.24■□□□□ 0.03
ERCC3-206ENST00000462306 SPTBP11277 2137 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 TARM1B6A8C7 271 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 FAM155BO75949 473 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 MT-ND3P03897 115 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 CYP2A7P20853 494 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 F8A1P23610 371 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 GPS2Q13227 327 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 NAB1Q13506 487 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 EFTUD2Q15029 972 aaKnown RBP eCLIP15.23■□□□□ 0.035e-6■■□□□ 13
ERCC3-206ENST00000462306 GRTP1Q5TC63 336 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 ZNF517Q6ZMY9 492 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-206ENST00000462306 MBOAT1Q6ZNC8 495 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 SYTL1Q8IYJ3 562 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 ANKRD49Q8WVL7 239 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 LRFN5Q96NI6 719 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 SPRTNQ9H040 489 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-206ENST00000462306 TSPYL1Q9H0U9 437 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 CAB39LQ9H9S4 337 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 GPN2Q9H9Y4 310 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-206ENST00000462306 POPDC3Q9HBV1 291 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 SLC6A20Q9NP91 592 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 LHX9Q9NQ69 397 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 EURLQ9NYK6 297 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-206ENST00000462306 IL17BQ9UHF5 180 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 PADI1Q9ULC6 663 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 PCDHGA4Q9Y5G9 962 aa15.23■□□□□ 0.03
ERCC3-206ENST00000462306 IGKV1-8A0A0C4DH67 115 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 E7EQ34 232 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 ZNF749O43361 778 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 NRP2O60462 931 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 CTSVO60911 334 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 OR2B3O76000 313 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 CCNYL3P0C7X3 344 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 CMPK1P30085 196 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 RPA3P35244 121 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 SPRP35270 261 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 RORAP35398 523 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 PRDX1Q06830 199 aaKnown RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 TSTA3Q13630 321 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 ZXDCQ2QGD7 858 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 ICE2Q659A1 982 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 SBSNQ6UWP8 590 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 MCATQ8IVS2 390 aaKnown RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 NKAPQ8N5F7 415 aaKnown RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 ANKRD7Q92527 254 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 N4BP2L2Q92802 583 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 KIAA1143Q96AT1 154 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 SLC45A3Q96JT2 553 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 FUT8Q9BYC5 575 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 CDC42EP4Q9H3Q1 356 aaKnown RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 ACTR5Q9H9F9 607 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-206ENST00000462306 GPAMQ9HCL2 828 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 TAC3Q9UHF0 121 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 CROTQ9UKG9 612 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 NBEAQ8NFP9 2946 aa15.22■□□□□ 0.03
ERCC3-206ENST00000462306 OR2A25A4D2G3 310 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 CDC7O00311 574 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 ENO2P09104 434 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 RHOXF2BP0C7M4 288 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 USP10Q14694 798 aaKnown RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 PPP1R3AQ16821 1122 aa15.21■□□□□ 0.03
ERCC3-206ENST00000462306 ZC3H12BQ5HYM0 836 aaKnown RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 FAM199XQ6PEV8 388 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-206ENST00000462306 AGTRAPQ6RW13 159 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms