RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 C20orf96Q9NUD7 363 aaPredicted RBP12.69□□□□□ -0.38
C9orf3-210ENST00000462125 FBXO5Q9UKT4 447 aa12.69□□□□□ -0.38
C9orf3-210ENST00000462125 TP53TG5Q9Y2B4 290 aa12.69□□□□□ -0.38
C9orf3-210ENST00000462125 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 ARHGEF33A8MVX0 844 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 C9J4A7 227 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 E5RI56 91 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 CEACAM4O75871 244 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 DNAJB5O75953 348 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 TTC4O95801 387 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 HSD17B2P37059 387 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 CASRP41180 1078 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 SLC1A2P43004 574 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 ARSFP54793 590 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 KCNC4Q03721 635 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 FASTKQ14296 549 aaKnown RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 TTLL9Q3SXZ7 439 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 NKAIN1Q4KMZ8 207 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 TCTE1Q5JU00 501 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 SYDE1Q6ZW31 735 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 OR2L3Q8NG85 312 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 GIMAP7Q8NHV1 300 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 ASB11Q8WXH4 323 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 INPP5DQ92835 1189 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 EBNA1BP2Q99848 306 aaKnown RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 NAT9Q9BTE0 207 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 SLC22A11Q9NSA0 550 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 DHCR7Q9UBM7 475 aaKnown RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 PADI2Q9Y2J8 665 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 PCDHGA9Q9Y5G4 932 aaKnown RBP12.68□□□□□ -0.38
C9orf3-210ENST00000462125 SAR1BQ9Y6B6 198 aa12.68□□□□□ -0.38
C9orf3-210ENST00000462125 FITM1A5D6W6 292 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 EIF3FO00303 357 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 CTSVO60911 334 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 CATP04040 527 aaKnown RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 TUBBP07437 444 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 MPC1LP0DKB6 136 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 PGAM1P18669 254 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 TLE1Q04724 770 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 KLRB1Q12918 225 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 GRM7Q14831 915 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 MSS51Q4VC12 460 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 C1orf189Q5VU69 101 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 MLIPQ5VWP3 458 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 ASB18Q6ZVZ8 466 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 MED25Q71SY5 747 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 TMEM102Q8N9M5 508 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 C2CD4AQ8NCU7 369 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 SMPDL3AQ92484 453 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 DLG3Q92796 817 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 NACC2Q96BF6 587 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 PTERQ96BW5 349 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 RUNDC3BQ96NL0 473 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 PKP4Q99569 1192 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 MIPEPQ99797 713 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 AARSD1Q9BTE6 412 aaKnown RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 CCDC68Q9H2F9 335 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 ACSS2Q9NR19 701 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 FAM114A2Q9NRY5 505 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 TXLNGQ9NUQ3 528 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 IFT80Q9P2H3 777 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-210ENST00000462125 ASIC3Q9UHC3 531 aa12.67□□□□□ -0.38
C9orf3-210ENST00000462125 OR2A25A4D2G3 310 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 SMAPO00193 183 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 CNOT3O75175 753 aaKnown RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 SNRNP200O75643 2136 aaKnown RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 ALBP02768 609 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 PDGFAP04085 211 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 F7P08709 466 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 NR1D1P20393 614 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 ITGAXP20702 1163 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 ALAS2P22557 587 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 PSMB5P28074 263 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 GABRB3P28472 473 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 SKIV2L2P42285 1042 aaKnown RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 CCL11P51671 97 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 YBX1P67809 324 aaKnown RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 MPP1Q00013 466 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 TIAL1Q01085 375 aaKnown RBP eCLIP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 RELAQ04206 551 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 PRDX1Q06830 199 aaKnown RBP12.66□□□□□ -0.38
C9orf3-210ENST00000462125 CBLBQ13191 982 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 CRYMQ14894 314 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 NAA25Q14CX7 972 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 FAM214AQ32MH5 1076 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 SPANXN3Q5MJ09 141 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 CPZQ66K79 652 aa12.66□□□□□ -0.38
C9orf3-210ENST00000462125 OVCH1Q7RTY7 1134 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms