RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 GCGRP47871 477 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 CNTN4Q8IWV2 1026 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 PROKR1Q8TCW9 393 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 ADAMTS17Q8TE56 1095 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 ASB11Q8WXH4 323 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 THAP4Q8WY91 577 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 SRPK3Q9UPE1 567 aa22.73■■□□□ 1.23
HOXB3-202ENST00000460160 HEMK1Q9Y5R4 338 aaPredicted RBP22.73■■□□□ 1.23
HOXB3-202ENST00000460160 TARM1B6A8C7 271 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 C9J4A7 227 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 SMAPO00193 183 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 SLC28A2O43868 658 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CTSVO60911 334 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 SEC31AO94979 1220 aaKnown RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 MPC1LP0DKB6 136 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ENO3P13929 434 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ELK3P41970 407 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ITGA8P53708 1063 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 TIAL1Q01085 375 aaKnown RBP eCLIP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 HP1BP3Q5SSJ5 553 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CYHR1Q6ZMK1 362 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 PRICKLE2Q7Z3G6 844 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 APLFQ8IW19 511 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CERS2Q96G23 380 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 SNF8Q96H20 258 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 PKP4Q99569 1192 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 NDNQ99608 321 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ZNF71Q9NQZ8 489 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 GFYI3L273 518 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 RFPL1O75677 317 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 YBX1P67809 324 aaKnown RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ARHGAP19Q14CB8 494 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 HIF1AQ16665 826 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ZC3H12BQ5HYM0 836 aaKnown RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 PIWIL4Q7Z3Z4 852 aaKnown RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CPNE9Q8IYJ1 553 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 FBXO15Q8NCQ5 510 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CFAP36Q96G28 342 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ZNF285Q96NJ3 590 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 KRT12Q99456 494 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 NDC1Q9BTX1 674 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 ACAT2Q9BWD1 397 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 TRIM31Q9BZY9 425 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 SLC17A6Q9P2U8 582 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 CHMP2BQ9UQN3 213 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 TEX264Q9Y6I9 313 aa22.72■■□□□ 1.23
HOXB3-202ENST00000460160 RP1L1Q8IWN7 2480 aaPredicted RBP22.71■■□□□ 1.23
HOXB3-202ENST00000460160 J3QKU1 62 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 NRP2O60462 931 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 VPS26AO75436 327 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 SUSD1Q6UWL2 747 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 KIAA0408Q6ZU52 694 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 PTRH1Q86Y79 214 aaKnown RBP22.71■■□□□ 1.23
HOXB3-202ENST00000460160 GABPB2Q8TAK5 448 aaPredicted RBP22.71■■□□□ 1.23
HOXB3-202ENST00000460160 SMPDL3AQ92484 453 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 DHRS4Q9BTZ2 278 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 TRIM55Q9BYV6 548 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 ENAMQ9NRM1 1142 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 TXLNGQ9NUQ3 528 aa22.71■■□□□ 1.23
HOXB3-202ENST00000460160 ZC3H7BQ9UGR2 993 aaKnown RBP22.71■■□□□ 1.23
HOXB3-202ENST00000460160 TNRC6AQ8NDV7 1962 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 PCSK5Q92824 1860 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 SUV39H1O43463 412 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 KLF7O75840 302 aaPredicted RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 DNAJB5O75953 348 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 SLC16A8O95907 504 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 AHSGP02765 367 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 CARSP49589 748 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 DCDP81605 110 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 RBM20Q5T481 1227 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 CPZQ66K79 652 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 STEAP4Q687X5 459 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 TRMT10BQ6PF06 316 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 GALNT7Q86SF2 657 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 LRRC39Q96DD0 335 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 C17orf62Q9BQA9 187 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 SELENOSQ9BQE4 189 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 SLC6A20Q9NP91 592 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 TRMT6Q9UJA5 497 aaKnown RBP22.7■■□□□ 1.22
HOXB3-202ENST00000460160 TLK1Q9UKI8 766 aa22.7■■□□□ 1.22
HOXB3-202ENST00000460160 EFCAB8A8MWE9 144 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 EIF3FO00303 357 aaPredicted RBP22.69■■□□□ 1.22
HOXB3-202ENST00000460160 MCM3P25205 808 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 HSD17B2P37059 387 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 PNLIPRP1P54315 467 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 CDKN2DP55273 166 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 ARL4CP56559 192 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 NKAIN1Q4KMZ8 207 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 TCTE1Q5JU00 501 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 TEDDM1Q5T9Z0 273 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 MLIPQ5VWP3 458 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 ZNF480Q8WV37 535 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 DPH7Q9BTV6 452 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 TP53TG5Q9Y2B4 290 aa22.69■■□□□ 1.22
HOXB3-202ENST00000460160 OR2A25A4D2G3 310 aa22.68■■□□□ 1.22
HOXB3-202ENST00000460160 MKRN2OSH3BPM6 223 aa22.68■■□□□ 1.22
HOXB3-202ENST00000460160 K7EM74 188 aa22.68■■□□□ 1.22
HOXB3-202ENST00000460160 ATXN8OSP0DMR3 200 aa22.68■■□□□ 1.22
HOXB3-202ENST00000460160 ITGAXP20702 1163 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms