RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SYCE1LA8MT33 242 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GRXCR1A8MXD5 290 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PFDN6O15212 129 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CLPXO76031 633 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 EN2P19622 333 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CDH3P22223 829 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GSSP48637 474 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LBX1P52954 281 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 VBP1P61758 197 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CACNG1Q06432 222 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PHKG1Q16816 387 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LY6G5CQ5SRR4 150 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CATSPEREQ5SY80 951 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 C6orf141Q5SZD1 244 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CCDC81Q6ZN84 652 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CHPT1Q8WUD6 406 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 FAM162AQ96A26 154 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CCDC138Q96M89 665 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 P2RY12Q9H244 342 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ACTR8Q9H981 624 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PSME2Q9UL46 239 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PDE10AQ9Y233 779 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GOLGA4Q13439 2230 aaKnown RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 H7C0S8 307 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PRMT5O14744 637 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 AREL1O15033 823 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GRM6O15303 877 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 EFCAB14O75071 495 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 E2F6O75461 281 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 FTH1P02794 183 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 UMPSP11172 480 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LHCGRP22888 699 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 HPCAL1P37235 193 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 MESP2Q0VG99 397 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 NFATC2Q13469 925 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GTF2H2Q13888 395 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CRY1Q16526 586 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GTF2H2CQ6P1K8 395 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GRASPQ7Z6J2 395 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 RNF175Q8N4F7 328 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 NKAPQ8N5F7 415 aaKnown RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 NETO1Q8TDF5 533 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 SH3YL1Q96HL8 342 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 RAD21L1Q9H4I0 556 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ITM2CQ9NQX7 267 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 TBCCD1Q9NVR7 557 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 MAGEL2Q9UJ55 1249 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 VPS4BO75351 444 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 JRKO75564 520 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LRATO95237 230 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 IGSF6O95976 241 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 EFNA1P20827 205 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PTGER3P43115 390 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 SLC14A1Q13336 389 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 C1QTNF12Q5T7M4 302 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LRRC66Q68CR7 880 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PTRHD1Q6GMV3 140 aaKnown RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 FAM109BQ6ICB4 259 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 LIX1Q8N485 282 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ZNF548Q8NEK5 533 aaPredicted RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 SLC13A3Q8WWT9 602 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 GTF2H4Q92759 462 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ATP13A3Q9H7F0 1226 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 HACD3Q9P035 362 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 ERVK-18Q9QC07 812 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 DAPK2Q9UIK4 370 aa12.1□□□□□ -0.47
LINC00959-201ENST00000456581 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
LINC00959-201ENST00000456581 A6NL46 340 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 H0YAE9 185 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 KLK8O60259 260 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 CBFA2T3O75081 653 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 SLC25A14O95258 325 aaPredicted RBP12.09□□□□□ -0.47
LINC00959-201ENST00000456581 TYRP14679 529 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 BMPR1AP36894 532 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 TMBIM6P55061 237 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 NCS1P62166 190 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 PHC1P78364 1004 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 PPP2R2BQ00005 443 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 CYP4F3Q08477 520 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00959-201ENST00000456581 FOXD4Q12950 439 aaPredicted RBP12.09□□□□□ -0.47
LINC00959-201ENST00000456581 RAPSNQ13702 412 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 KIAA0040Q15053 153 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 CTF1Q16619 201 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 ADPRMQ3LIE5 342 aa12.09□□□□□ -0.47
LINC00959-201ENST00000456581 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms