RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NTN1O95631 604 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 S1PR4O95977 384 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HOXB3P14651 431 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CNTFP26441 200 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 POU1F1P28069 291 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CLCN4P51793 760 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 WNT3AP56704 352 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 IL5RAQ01344 420 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GALNT1Q10472 559 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 BTN1A1Q13410 526 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC14A2Q15849 920 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 AASDHQ4L235 1098 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GPAT3Q53EU6 434 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GRTP1Q5TC63 336 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 BRAT1Q6PJG6 821 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HACD2Q6Y1H2 254 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 IDO2Q6ZQW0 420 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GALNT7Q86SF2 657 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EDARADDQ8WWZ3 215 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC38A4Q969I6 547 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 AKT1S1Q96B36 256 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM149B1Q96BN6 582 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC39A13Q96H72 371 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C7orf34Q96L11 122 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 COPS4Q9BT78 406 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TAPBPLQ9BX59 468 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RPRD1BQ9NQG5 326 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GLTPQ9NZD2 209 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RNF112Q9ULX5 631 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 STAP1Q9ULZ2 295 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 VPS9D1Q9Y2B5 631 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CFAP20Q9Y6A4 193 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CACNA1EQ15878 2313 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CASP8AP2Q9UKL3 1982 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MTSS1O43312 755 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EEDO75530 441 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR4F21O95013 312 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PTTG1O95997 202 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CST1P01037 141 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PRKCBP05771 671 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PROS1P07225 676 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FGF4P08620 206 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PSKH1P11801 424 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 POU2F1P14859 743 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 NOS2P35228 1153 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PBX3P40426 434 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MAGEA2P43356 314 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CPT1AP50416 773 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SERPINH1P50454 418 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EPHA5P54756 1037 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MRPS15P82914 257 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 E2F1Q01094 437 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MXD1Q05195 221 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM132BQ14DG7 1078 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PUS10Q3MIT2 529 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MARCH8Q5T0T0 291 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR4F3Q6IEY1 312 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CCDC28AQ8IWP9 274 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C8orf59Q8N0T1 100 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MDGA1Q8NFP4 955 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ANGPTL6Q8NI99 470 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EDEM1Q92611 657 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CDKL2Q92772 493 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PBXIP1Q96AQ6 731 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MYO19Q96H55 970 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 IL22Q9GZX6 179 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 NUAK2Q9H093 628 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 VPS33BQ9H267 617 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MID1IP1Q9NPA3 183 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 B3GAT2Q9NPZ5 323 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GIMAP4Q9NUV9 329 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 NLKQ9UBE8 527 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM50BQ9Y247 325 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 IGKV6-21A0A0C4DH24 114 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LGALS8O00214 317 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HYAL3O43820 417 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 AIREO43918 545 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 KIAA0513O60268 411 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CLASP2O75122 1294 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PPM1BO75688 479 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MATN4O95460 622 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR12D1P0DN82 309 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CFL1P23528 166 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RRM2P31350 389 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C2orf80Q0P641 193 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SERTAD2Q14140 314 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FGFBP1Q14512 234 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 STARD3Q14849 445 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 POU4F3Q15319 338 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HKDC1Q2TB90 917 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ESCO2Q56NI9 601 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 IRAK1BP1Q5VVH5 260 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC6A19Q695T7 634 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 KANSL1Q7Z3B3 1105 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LIMS2Q7Z4I7 341 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LRRTM4Q86VH4 590 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms