RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 TRIM46Q7Z4K8 759 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 AMZ2Q86W34 360 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 USP7Q93009 1102 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 GBP5Q96PP8 586 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 SLC6A17Q9H1V8 727 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 DYTNA2CJ06 578 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 DPPA5A6NC42 116 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 LIN7AO14910 233 aaPredicted RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 PEX1O43933 1283 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 GBAP04062 536 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 LYNP07948 512 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 HSD17B1P14061 328 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 COX7A2P14406 83 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 JUPP14923 745 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 JAK1P23458 1154 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 TBPL1P62380 186 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 RAB30Q15771 203 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 OR4F3Q6IEY1 312 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 SDE2Q6IQ49 451 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 NEK10Q6ZWH5 1172 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 GPR180Q86V85 440 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 FAM162AQ96A26 154 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ABCD2Q9UBJ2 740 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ANAPC2Q9UJX6 822 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 PSIP1O75475 530 aaKnown RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 IL6P05231 212 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 C8BP07358 591 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ZFP36L2P47974 494 aaKnown RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 METTL2BQ6P1Q9 378 aaKnown RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ZNF480Q8WV37 535 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 NEIL2Q969S2 332 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 MRPL38Q96DV4 380 aaKnown RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 FAM120BQ96EK7 910 aaKnown RBP13.25□□□□□ -0.29
CLK3-203ENST00000454830 CENPKQ9BS16 269 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 SH3BP4Q9P0V3 963 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 VPS29Q9UBQ0 182 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 CCL27Q9Y4X3 112 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 FADS3Q9Y5Q0 445 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 TRANK1O15050 2925 aa13.25□□□□□ -0.29
CLK3-203ENST00000454830 ZFC3H1O60293 1989 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 PDLIM1O00151 329 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 SLC31A1O15431 190 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 NELFEP18615 380 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 GALK1P51570 392 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 GBX1Q14549 363 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 CATSPEREQ5SY80 951 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 NOXRED1Q6NXP6 359 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 ZNF621Q6ZSS3 439 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 LMAN2LQ9H0V9 348 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 RMND5AQ9H871 391 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 FBXL12Q9NXK8 326 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TCRBV3S1A0A5B6 114 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 MGAT4DA6NG13 374 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 CASQ2O14958 399 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 POU2F2P09086 479 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 LAMP2P13473 410 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 SDC1P18827 310 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 CAMK2GQ13555 558 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 C1orf52Q8N6N3 182 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 GLB1L3Q8NCI6 653 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 SLCO4A1Q96BD0 722 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 CDCA3Q99618 268 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 CXorf56Q9H5V9 222 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 SLC52A3Q9NQ40 469 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 SERGEFQ9UGK8 458 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 RFXANKO14593 260 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 C1orf105O95561 183 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 SOD1P00441 154 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 ABCB1P08183 1280 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 ACP5P13686 325 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 DLX2Q07687 328 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLK3-203ENST00000454830 USP39Q53GS9 565 aaKnown RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 C8orf82Q6P1X6 216 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 ZNF514Q96K75 400 aaPredicted RBP13.24□□□□□ -0.29
CLK3-203ENST00000454830 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
CLK3-203ENST00000454830 AQP12BA6NM10 295 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 TGFB1P01137 390 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms