RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TMEM26Q6ZUK4 368 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 KIAA0907Q7Z7F0 614 aaPredicted RBP12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 DCP2Q8IU60 420 aaKnown RBP12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 RAVER1Q8IY67 606 aaKnown RBP12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 SPARTQ8N0X7 666 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 OR8J2Q8NGG1 315 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 MCOLN3Q8TDD5 553 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 SNX19Q92543 992 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 NELL1Q92832 810 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 BORCS5Q969J3 196 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 MUL1Q969V5 352 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 HIST1H2AHQ96KK5 128 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 FRG2BQ96QU4 278 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 HIST1H2AJQ99878 128 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 H2AFJQ9BTM1 129 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 ELOVL6Q9H5J4 265 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 TM9SF3Q9HD45 589 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 PCDHGA8Q9Y5G5 932 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 V9GYQ6 96 aa12.17□□□□□ -0.46
ECHDC1-209ENST00000454591 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ABHD14A-ACY1A0A1B0GW23 586 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 LEFTY2O00292 366 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SGTAO43765 313 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 UGT2B11O75310 529 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SERPINA1P01009 418 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ABCB1P08183 1280 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 GSTM1P09488 218 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PCNAP12004 261 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 BMP1P13497 986 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 JUNDP17535 347 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CCNA2P20248 432 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PPM1AP35813 382 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CCL23P55773 120 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CYP4F8P98187 520 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 GSTM4Q03013 218 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CD47Q08722 323 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 VEZF1Q14119 521 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 KEAP1Q14145 624 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CPSF6Q16630 551 aaKnown RBP eCLIP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 NOXRED1Q6NXP6 359 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 KLHL35Q6PF15 583 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ELMSAN1Q6PJG2 1045 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 BRAT1Q6PJG6 821 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 GCNT7Q6ZNI0 430 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PIWIL3Q7Z3Z3 882 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 R3HCC1LQ7Z5L2 792 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SETD9Q8NE22 299 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 WDR20Q8TBZ3 569 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 HCAR2Q8TDS4 363 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 FKBP10Q96AY3 582 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SMURF2Q9HAU4 748 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 BRF2Q9HAW0 419 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PREBQ9HCU5 417 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 IL1RAPQ9NPH3 570 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 THG1LQ9NWX6 298 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 B4GALT6Q9UBX8 382 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SLC25A13Q9UJS0 675 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 RPS6KA6Q9UK32 745 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PSME2Q9UL46 239 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 MAGED1Q9Y5V3 778 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 EVPLLA8MZ36 301 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 H0YIV9 168 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PQBP1O60828 265 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PSIP1O75475 530 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 FKBP9O95302 570 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 FTH1P02794 183 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CKMP06732 381 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 HTR1AP08908 422 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CYP2A6P11509 494 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 MATN1P21941 496 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 TACR1P25103 407 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 DDX6P26196 483 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■■□□ 18.3
ECHDC1-209ENST00000454591 ACVR2AP27037 513 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 HLA-FP30511 346 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 VIPR1P32241 457 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SOX11P35716 441 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PIGAP37287 484 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 HNF4AP41235 474 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 KIR3DL1P43629 444 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 YAP1P46937 504 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ENTPD1P49961 510 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PNLIPRP1P54315 467 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 WNT3P56703 355 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 PFN3P60673 137 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 LRRC74AQ0VAA2 488 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ACOX1Q15067 660 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CTU2Q2VPK5 515 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms