RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SRPX2O60687 465 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 VPS26AO75436 327 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 ZIC2O95409 532 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 CTSBP07858 339 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 MPC1LP0DKB6 136 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 NR1D1P20393 614 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 PSMB5P28074 263 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 OTX2P32243 289 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 RPA3P35244 121 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 PAFAH1B1P43034 410 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 PGDP52209 483 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 TSTA3Q13630 321 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 SSPNQ14714 243 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 CRYMQ14894 314 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 ARHGAP19Q14CB8 494 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 FAM214AQ32MH5 1076 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 BBS9Q3SYG4 887 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 HSP90AA5PQ58FG0 334 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 SPANXN3Q5MJ09 141 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 FAM69BQ5VUD6 431 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 CPZQ66K79 652 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 TTLL10Q6ZVT0 673 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 MED25Q71SY5 747 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 KLHL7Q8IXQ5 586 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 AGGF1Q8N302 714 aaeCLIP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 TMEM102Q8N9M5 508 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 OR2A1Q8NGT9 310 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 INPP5DQ92835 1189 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 GPR21Q99679 349 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 NAPGQ99747 312 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 EBNA1BP2Q99848 306 aaKnown RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 ACAT2Q9BWD1 397 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 EPN3Q9H201 632 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 IARS2Q9NSE4 1012 aaKnown RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 DHRS7Q9Y394 339 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 PTRH2Q9Y3E5 179 aaKnown RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 PCDHGA9Q9Y5G4 932 aaKnown RBP10.25□□□□□ -0.77
DDX39A-203ENST00000454233 SAR1BQ9Y6B6 198 aa10.25□□□□□ -0.77
DDX39A-203ENST00000454233 A0A1W2PPV9 198 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 K7EM74 188 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 SMAPO00193 183 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 EIF3FO00303 357 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PEX12O00623 359 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 DSCR3O14972 297 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ZBTB14O43829 449 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 KLF7O75840 302 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 HAUS5O94927 633 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 CCNDBP1O95273 360 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 SYF2O95926 243 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 IGHEP01854 428 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 F7P08709 466 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ERVK-10P10266 1014 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ERGP11308 486 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PNLIPRP1P54315 467 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 VSX2P58304 361 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 MPP1Q00013 466 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 DR1Q01658 176 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 CUL1Q13616 776 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ATP1A4Q13733 1029 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 FASTKQ14296 549 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 SLC9A5Q14940 896 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 MORF4L2Q15014 288 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PAPD7Q5XG87 772 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 LRRC8EQ6NSJ5 796 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ZNF549Q6P9A3 640 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PDIK1LQ8N165 341 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 FBXO15Q8NCQ5 510 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 C2CD4AQ8NCU7 369 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 OR2Y1Q8NGV0 311 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 GIMAP7Q8NHV1 300 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 FKBP10Q96AY3 582 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PTERQ96BW5 349 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PDLIM2Q96JY6 352 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 FER1L6-AS2Q96M78 137 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 PKP4Q99569 1192 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 SLC30A3Q99726 388 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 AARSD1Q9BTE6 412 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 DPH7Q9BTV6 452 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 MRPS30Q9NP92 439 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 CUTCQ9NTM9 273 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 UTP6Q9NYH9 597 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 ANKMY1Q9P2S6 941 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 TRMT6Q9UJA5 497 aaKnown RBP10.24□□□□□ -0.77
DDX39A-203ENST00000454233 KLK4Q9Y5K2 254 aa10.24□□□□□ -0.77
DDX39A-203ENST00000454233 A0A0J9YVX5 310 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 OR2A25A4D2G3 310 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 CCDC188H7C350 402 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 CTSVO60911 334 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 BANF1O75531 89 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 ALBP02768 609 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 EIF2S1P05198 315 aaKnown RBP10.23□□□□□ -0.77
DDX39A-203ENST00000454233 MCM3P25205 808 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
DDX39A-203ENST00000454233 GCGRP47871 477 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 RGS4P49798 205 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 WASHC2DQ5SRD0 308 aa10.23□□□□□ -0.77
DDX39A-203ENST00000454233 THEMIS2Q5TEJ8 643 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms