RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 LRRC49Q8IUZ0 686 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 CLECL1Q8IZS7 167 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 MDGA1Q8NFP4 955 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 DYNC2LI1Q8TCX1 351 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 MTERF3Q96E29 417 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 ACTL8Q9H568 366 aa16.85■□□□□ 0.29
TCF3-204ENST00000453954 NUDT7P0C024 238 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 RHOQP17081 205 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 ADAM2Q99965 735 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 MRM3Q9HC36 420 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 NUFIP1Q9UHK0 495 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 IFRD1O00458 451 aaPredicted RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 FPGTO14772 594 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 TMCC2O75069 709 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 BCKDHAP12694 445 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 DNAJB1P25685 340 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 EIF2DP41214 584 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 ARPC4P59998 168 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 RPS14P62263 151 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 VARS2Q5ST30 1063 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 SLC34A3Q8N130 599 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 RHEBL1Q8TAI7 183 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 KCNN1Q92952 543 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 CTRCQ99895 268 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 NUSAP1Q9BXS6 441 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 SDK1Q7Z5N4 2213 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 GNG14A0A1W2PPG7 69 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 PCDHGA12O60330 932 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 TIAL1Q01085 375 aaKnown RBP eCLIP16.84■□□□□ 0.29
TCF3-204ENST00000453954 CCL15Q16663 113 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 SMU1Q2TAY7 513 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 PLEKHG6Q3KR16 790 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 INO80DQ53TQ3 878 aaPredicted RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 MFSD14CQ5VZR4 134 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 SYCE2Q6PIF2 218 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 GDPD3Q7L5L3 318 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 CARNMT1Q8N4J0 409 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 ZNF556Q9HAH1 456 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 AGO1Q9UL18 857 aaKnown RBP16.84■□□□□ 0.29
TCF3-204ENST00000453954 IFT52Q9Y366 437 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 N6AMT1Q9Y5N5 214 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 MYO9BQ13459 2157 aa16.84■□□□□ 0.29
TCF3-204ENST00000453954 H3BN98 237 aa16.83■□□□□ 0.29
TCF3-204ENST00000453954 RHOCP08134 193 aa16.83■□□□□ 0.29
TCF3-204ENST00000453954 FEN1P39748 380 aaKnown RBP16.83■□□□□ 0.29
TCF3-204ENST00000453954 ST3GAL4Q11206 333 aa16.83■□□□□ 0.29
TCF3-204ENST00000453954 ASIC4Q96FT7 647 aa16.83■□□□□ 0.29
TCF3-204ENST00000453954 NECTIN3Q9NQS3 549 aa16.83■□□□□ 0.29
TCF3-204ENST00000453954 TLR8Q9NR97 1041 aaKnown RBP16.83■□□□□ 0.29
TCF3-204ENST00000453954 DNMT3BQ9UBC3 853 aaKnown RBP16.83■□□□□ 0.29
TCF3-204ENST00000453954 AGAP5A6NIR3 686 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 CLIC1O00299 241 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 MTX2O75431 263 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 EPN2O95208 641 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 SOX14O95416 240 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 TTPAP49638 278 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 SLC14A1Q13336 389 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 CAMK2GQ13555 558 aaPredicted RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 PRR23CQ6ZRP0 262 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 LINC01465Q8N7H1 131 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 ASCC1Q8N9N2 400 aaKnown RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 PCNPQ8WW12 178 aaKnown RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 SLC38A4Q969I6 547 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 MED8Q96G25 268 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 COPS8Q99627 209 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 FAM126AQ9BYI3 521 aaPredicted RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 GKN1Q9NS71 199 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 PCDHGB6Q9Y5F9 930 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 KIAA0513O60268 411 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 BMP1P13497 986 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 NFKB2Q00653 900 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 RFX4Q33E94 735 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 SLIRPQ9GZT3 109 aaKnown RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 ABHD16BQ9H3Z7 469 aa16.83■□□□□ 0.28
TCF3-204ENST00000453954 FCF1Q9Y324 198 aaKnown RBP16.83■□□□□ 0.28
TCF3-204ENST00000453954 DNAJC25-GNG10A0A024R161 153 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 MROH6A6NGR9 719 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 TPST2O60704 377 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 KRT6AP02538 564 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 KRT6BP04259 564 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 RPLP0P05388 317 aaKnown RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 KRT6CP48668 564 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 PRIM2P49643 509 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 ATN1P54259 1190 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 KIAA1614Q5VZ46 1190 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CPZQ66K79 652 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 SDE2Q6IQ49 451 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 FAM131AQ6UXB0 335 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 BHLHA9Q7RTU4 235 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 ZNF675Q8TD23 568 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CD200R1Q8TD46 325 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 FYTTD1Q96QD9 318 aaKnown RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 VPS35Q96QK1 796 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 PHOX2BQ99453 314 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 FEVQ99581 238 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 TMEFF2Q9UIK5 374 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 A0A0G2JLL6 359 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms