RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 KLK6Q92876 244 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 NCLNQ969V3 563 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 PPP1R16AQ96I34 528 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 NKX2-4Q9H2Z4 354 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 YY1AP1Q9H869 796 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 SGK2Q9HBY8 427 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 PLAGL1Q9UM63 463 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 PCDHB14Q9Y5E9 798 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 CFAP20Q9Y6A4 193 aaKnown RBP11.43□□□□□ -0.58
VTA1-203ENST00000452973 NUMA1Q14980 2115 aa11.43□□□□□ -0.58
VTA1-203ENST00000452973 EPOPA6NHQ4 379 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 POP7O75817 140 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 PCCBP05166 539 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 P2RY2P41231 377 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 RUNX3Q13761 415 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GTF2H3Q13889 308 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 NOXRED1Q6NXP6 359 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 ERN2Q76MJ5 926 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 CXorf40AQ8TE69 158 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GLMNQ92990 594 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 CCDC138Q96M89 665 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 ZNF583Q96ND8 569 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 NRTNQ99748 197 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 ACAT2Q9BWD1 397 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GPRC5BQ9NZH0 403 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PCYT1BQ9Y5K3 369 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 C2orf16Q68DN1 1984 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 MAGEB17A8MXT2 336 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 KAT7O95251 611 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 NPPAP01160 153 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GBAP04062 536 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 ZNF8P17098 575 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 HTR1EP28566 365 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 OPRD1P41143 372 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 CDKN2CP42773 168 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 SEC13P55735 322 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PDGFRLQ15198 375 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 CATSPEREQ5SY80 951 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 FOXB2Q5VYV0 432 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 NEK10Q6ZWH5 1172 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PTRH1Q86Y79 214 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 NRSN1Q8IZ57 195 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 MARVELD2Q8N4S9 558 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 OR7A2PQ8NGA2 310 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 NEIL2Q969S2 332 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 DUS3LQ96G46 650 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 RPP25Q9BUL9 199 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 CHID1Q9BWS9 393 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 TMEM245Q9H330 911 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PRSS16Q9NQE7 514 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 AGPAT4Q9NRZ5 378 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PPT2Q9UMR5 302 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 A0A1B0GTW7 788 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 TCRBV5S2A0A599 114 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 SAP18O00422 153 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 C1QCP02747 245 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 MYCLP1P12525 358 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 AMD1P17707 334 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GRIA2P42262 883 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 PYCR3Q53H96 274 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 OTUD3Q5T2D3 398 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 KRT80Q6KB66 452 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 CHCHD4Q8N4Q1 142 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 FAM86B1Q8N7N1 296 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 GLB1L3Q8NCI6 653 aaPredicted RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 ZNF480Q8WV37 535 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 ATL1Q8WXF7 558 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 VPS29Q9UBQ0 182 aa11.42□□□□□ -0.58
VTA1-203ENST00000452973 TDRKHQ9Y2W6 561 aaKnown RBP11.42□□□□□ -0.58
VTA1-203ENST00000452973 IGLON5A6NGN9 336 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 SEC24DO94855 1032 aaPredicted RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 C1orf105O95561 183 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ETHE1O95571 254 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 GPIP06744 558 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 BMP2P12643 396 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ZNF23P17027 643 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 CLDN8P56748 225 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ACSM2AQ08AH3 577 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 EIF4HQ15056 248 aaKnown RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 GGTA1PQ4G0N0 100 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ACSM2BQ68CK6 577 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 GPR180Q86V85 440 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 EPHX4Q8IUS5 362 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 ZNF547Q8IVP9 402 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 C10orf111Q8N326 155 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 HCAR2Q8TDS4 363 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 CMTM7Q96FZ5 175 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 IL17FQ96PD4 163 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 ZCCHC2Q9C0B9 1178 aaKnown RBP11.41□□□□□ -0.58
VTA1-203ENST00000452973 TM7SF3Q9NS93 570 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 NEUROG3Q9Y4Z2 214 aa11.41□□□□□ -0.58
VTA1-203ENST00000452973 DOCK9Q9BZ29 2069 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms